Protein–RNA interactions for Protein: Q9CQQ8

Lsm7, U6 snRNA-associated Sm-like protein LSm7, mousemouse

Known RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm7Q9CQQ8 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Lsm7Q9CQQ8 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Lsm7Q9CQQ8 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Lsm7Q9CQQ8 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Lsm7Q9CQQ8 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Lsm7Q9CQQ8 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Lsm7Q9CQQ8 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC23.04■■□□□ 1.28
Lsm7Q9CQQ8 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Lsm7Q9CQQ8 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC23.04■■□□□ 1.28
Lsm7Q9CQQ8 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC23.04■■□□□ 1.28
Lsm7Q9CQQ8 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Lsm7Q9CQQ8 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Lsm7Q9CQQ8 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Lsm7Q9CQQ8 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Lsm7Q9CQQ8 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Lsm7Q9CQQ8 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Lsm7Q9CQQ8 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Lsm7Q9CQQ8 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Lsm7Q9CQQ8 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Lsm7Q9CQQ8 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Lsm7Q9CQQ8 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Lsm7Q9CQQ8 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC23.01■■□□□ 1.27
Lsm7Q9CQQ8 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC23.01■■□□□ 1.27
Lsm7Q9CQQ8 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC23.01■■□□□ 1.27
Lsm7Q9CQQ8 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC23■■□□□ 1.27
Lsm7Q9CQQ8 Gm7332-201ENSMUST00000118351 454 ntBASIC23■■□□□ 1.27
Lsm7Q9CQQ8 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC23■■□□□ 1.27
Lsm7Q9CQQ8 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Lsm7Q9CQQ8 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Lsm7Q9CQQ8 AC122428.3-201ENSMUST00000215551 2290 ntBASIC22.99■■□□□ 1.27
Lsm7Q9CQQ8 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC22.99■■□□□ 1.27
Lsm7Q9CQQ8 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
Lsm7Q9CQQ8 Gm14523-201ENSMUST00000117260 558 ntBASIC22.99■■□□□ 1.27
Lsm7Q9CQQ8 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC22.99■■□□□ 1.27
Lsm7Q9CQQ8 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC22.99■■□□□ 1.27
Lsm7Q9CQQ8 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC22.99■■□□□ 1.27
Lsm7Q9CQQ8 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC22.99■■□□□ 1.27
Lsm7Q9CQQ8 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC22.99■■□□□ 1.27
Lsm7Q9CQQ8 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Lsm7Q9CQQ8 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC22.98■■□□□ 1.27
Lsm7Q9CQQ8 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Lsm7Q9CQQ8 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC22.97■■□□□ 1.27
Lsm7Q9CQQ8 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC22.97■■□□□ 1.27
Lsm7Q9CQQ8 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC22.97■■□□□ 1.27
Lsm7Q9CQQ8 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
Lsm7Q9CQQ8 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC22.97■■□□□ 1.27
Lsm7Q9CQQ8 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC22.96■■□□□ 1.27
Lsm7Q9CQQ8 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC22.95■■□□□ 1.26
Lsm7Q9CQQ8 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
Lsm7Q9CQQ8 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Lsm7Q9CQQ8 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Lsm7Q9CQQ8 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Lsm7Q9CQQ8 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC22.93■■□□□ 1.26
Lsm7Q9CQQ8 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC22.92■■□□□ 1.26
Lsm7Q9CQQ8 Gm44428-201ENSMUST00000204474 874 ntBASIC22.92■■□□□ 1.26
Lsm7Q9CQQ8 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Lsm7Q9CQQ8 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC22.92■■□□□ 1.26
Lsm7Q9CQQ8 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Lsm7Q9CQQ8 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC22.91■■□□□ 1.26
Lsm7Q9CQQ8 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC22.9■■□□□ 1.26
Lsm7Q9CQQ8 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Lsm7Q9CQQ8 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Lsm7Q9CQQ8 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Lsm7Q9CQQ8 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC22.89■■□□□ 1.25
Lsm7Q9CQQ8 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
Lsm7Q9CQQ8 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC22.88■■□□□ 1.25
Lsm7Q9CQQ8 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
Lsm7Q9CQQ8 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC22.88■■□□□ 1.25
Lsm7Q9CQQ8 AC151971.4-201ENSMUST00000214717 704 ntBASIC22.88■■□□□ 1.25
Lsm7Q9CQQ8 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
Lsm7Q9CQQ8 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC22.87■■□□□ 1.25
Lsm7Q9CQQ8 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC22.87■■□□□ 1.25
Lsm7Q9CQQ8 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC22.87■■□□□ 1.25
Lsm7Q9CQQ8 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC22.87■■□□□ 1.25
Lsm7Q9CQQ8 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Lsm7Q9CQQ8 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC22.87■■□□□ 1.25
Lsm7Q9CQQ8 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC22.87■■□□□ 1.25
Lsm7Q9CQQ8 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC22.87■■□□□ 1.25
Lsm7Q9CQQ8 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC22.87■■□□□ 1.25
Lsm7Q9CQQ8 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Lsm7Q9CQQ8 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
Lsm7Q9CQQ8 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
Lsm7Q9CQQ8 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Lsm7Q9CQQ8 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Lsm7Q9CQQ8 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Lsm7Q9CQQ8 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
Lsm7Q9CQQ8 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Lsm7Q9CQQ8 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Lsm7Q9CQQ8 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
Lsm7Q9CQQ8 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Lsm7Q9CQQ8 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
Lsm7Q9CQQ8 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
Lsm7Q9CQQ8 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC22.85■■□□□ 1.25
Lsm7Q9CQQ8 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC22.84■■□□□ 1.25
Lsm7Q9CQQ8 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC22.84■■□□□ 1.25
Lsm7Q9CQQ8 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC22.83■■□□□ 1.25
Lsm7Q9CQQ8 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Lsm7Q9CQQ8 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Lsm7Q9CQQ8 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Lsm7Q9CQQ8 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms