Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Pcdha3Q91Y16 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC23.75■■□□□ 1.39
Pcdha3Q91Y16 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Pcdha3Q91Y16 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Pcdha3Q91Y16 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
Pcdha3Q91Y16 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC23.75■■□□□ 1.39
Pcdha3Q91Y16 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC23.75■■□□□ 1.39
Pcdha3Q91Y16 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
Pcdha3Q91Y16 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC23.74■■□□□ 1.39
Pcdha3Q91Y16 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC23.74■■□□□ 1.39
Pcdha3Q91Y16 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC23.74■■□□□ 1.39
Pcdha3Q91Y16 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC23.74■■□□□ 1.39
Pcdha3Q91Y16 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Pcdha3Q91Y16 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC23.74■■□□□ 1.39
Pcdha3Q91Y16 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Pcdha3Q91Y16 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Pcdha3Q91Y16 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Pcdha3Q91Y16 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC23.72■■□□□ 1.39
Pcdha3Q91Y16 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Pcdha3Q91Y16 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Pcdha3Q91Y16 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC23.72■■□□□ 1.39
Pcdha3Q91Y16 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Pcdha3Q91Y16 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
Pcdha3Q91Y16 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Pcdha3Q91Y16 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
Pcdha3Q91Y16 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC23.7■■□□□ 1.38
Pcdha3Q91Y16 Gm4419-202ENSMUST00000226239 1431 ntBASIC23.69■■□□□ 1.38
Pcdha3Q91Y16 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Pcdha3Q91Y16 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Pcdha3Q91Y16 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Pcdha3Q91Y16 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC23.67■■□□□ 1.38
Pcdha3Q91Y16 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Pcdha3Q91Y16 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Pcdha3Q91Y16 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Pcdha3Q91Y16 Il17rd-202ENSMUST00000223942 2186 ntBASIC23.67■■□□□ 1.38
Pcdha3Q91Y16 Pkd1-207ENSMUST00000228550 1050 ntBASIC23.66■■□□□ 1.38
Pcdha3Q91Y16 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Pcdha3Q91Y16 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Pcdha3Q91Y16 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Pcdha3Q91Y16 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Pcdha3Q91Y16 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC23.66■■□□□ 1.38
Pcdha3Q91Y16 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Pcdha3Q91Y16 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Pcdha3Q91Y16 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC23.65■■□□□ 1.38
Pcdha3Q91Y16 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC23.65■■□□□ 1.38
Pcdha3Q91Y16 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Pcdha3Q91Y16 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
Pcdha3Q91Y16 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
Pcdha3Q91Y16 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Pcdha3Q91Y16 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC23.64■■□□□ 1.37
Pcdha3Q91Y16 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Pcdha3Q91Y16 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
Pcdha3Q91Y16 Gm12818-201ENSMUST00000117562 1349 ntBASIC23.63■■□□□ 1.37
Pcdha3Q91Y16 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
Pcdha3Q91Y16 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Pcdha3Q91Y16 Gm45364-201ENSMUST00000210883 159 ntBASIC23.63■■□□□ 1.37
Pcdha3Q91Y16 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC23.63■■□□□ 1.37
Pcdha3Q91Y16 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC23.62■■□□□ 1.37
Pcdha3Q91Y16 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Pcdha3Q91Y16 Gm42699-201ENSMUST00000198104 1657 ntBASIC23.62■■□□□ 1.37
Pcdha3Q91Y16 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Pcdha3Q91Y16 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Pcdha3Q91Y16 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
Pcdha3Q91Y16 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Pcdha3Q91Y16 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
Pcdha3Q91Y16 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC23.61■■□□□ 1.37
Pcdha3Q91Y16 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC23.6■■□□□ 1.37
Pcdha3Q91Y16 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
Pcdha3Q91Y16 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Pcdha3Q91Y16 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC23.59■■□□□ 1.37
Pcdha3Q91Y16 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Pcdha3Q91Y16 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
Pcdha3Q91Y16 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Pcdha3Q91Y16 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC23.58■■□□□ 1.37
Pcdha3Q91Y16 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Pcdha3Q91Y16 Gm9812-201ENSMUST00000061934 968 ntBASIC23.58■■□□□ 1.37
Pcdha3Q91Y16 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC23.57■■□□□ 1.36
Pcdha3Q91Y16 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
Pcdha3Q91Y16 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
Pcdha3Q91Y16 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Pcdha3Q91Y16 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC23.56■■□□□ 1.36
Pcdha3Q91Y16 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC23.56■■□□□ 1.36
Pcdha3Q91Y16 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Pcdha3Q91Y16 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
Pcdha3Q91Y16 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Pcdha3Q91Y16 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC23.56■■□□□ 1.36
Pcdha3Q91Y16 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
Pcdha3Q91Y16 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Pcdha3Q91Y16 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC23.55■■□□□ 1.36
Pcdha3Q91Y16 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
Pcdha3Q91Y16 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
Pcdha3Q91Y16 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Pcdha3Q91Y16 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC23.55■■□□□ 1.36
Pcdha3Q91Y16 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
Pcdha3Q91Y16 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC23.54■■□□□ 1.36
Pcdha3Q91Y16 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC23.54■■□□□ 1.36
Pcdha3Q91Y16 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Pcdha3Q91Y16 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC23.54■■□□□ 1.36
Pcdha3Q91Y16 Mir6538-201ENSMUST00000183713 110 ntBASIC23.54■■□□□ 1.36
Pcdha3Q91Y16 AC122317.2-201ENSMUST00000218708 1248 ntBASIC23.54■■□□□ 1.36
Retrieved 100 of 76,532 protein–RNA pairs in 17 ms