Protein–RNA interactions for Protein: Q91XX8

Pcdhgb1, Protocadherin gamma B1, mousemouse

Predictions only

Length 918 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb1Q91XX8 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Pcdhgb1Q91XX8 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC23.68■■□□□ 1.38
Pcdhgb1Q91XX8 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
Pcdhgb1Q91XX8 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Pcdhgb1Q91XX8 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC23.67■■□□□ 1.38
Pcdhgb1Q91XX8 AC151971.4-201ENSMUST00000214717 704 ntBASIC23.67■■□□□ 1.38
Pcdhgb1Q91XX8 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Pcdhgb1Q91XX8 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Pcdhgb1Q91XX8 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Pcdhgb1Q91XX8 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Pcdhgb1Q91XX8 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
Pcdhgb1Q91XX8 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC23.65■■□□□ 1.38
Pcdhgb1Q91XX8 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Pcdhgb1Q91XX8 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
Pcdhgb1Q91XX8 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
Pcdhgb1Q91XX8 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC23.64■■□□□ 1.37
Pcdhgb1Q91XX8 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Pcdhgb1Q91XX8 Terc-201ENSMUST00000082862 423 ntBASIC23.64■■□□□ 1.37
Pcdhgb1Q91XX8 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Pcdhgb1Q91XX8 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Pcdhgb1Q91XX8 AC153911.1-201ENSMUST00000220378 758 ntBASIC23.63■■□□□ 1.37
Pcdhgb1Q91XX8 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Pcdhgb1Q91XX8 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC23.62■■□□□ 1.37
Pcdhgb1Q91XX8 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC23.62■■□□□ 1.37
Pcdhgb1Q91XX8 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC23.62■■□□□ 1.37
Pcdhgb1Q91XX8 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
Pcdhgb1Q91XX8 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Pcdhgb1Q91XX8 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Pcdhgb1Q91XX8 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
Pcdhgb1Q91XX8 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC23.62■■□□□ 1.37
Pcdhgb1Q91XX8 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC23.61■■□□□ 1.37
Pcdhgb1Q91XX8 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
Pcdhgb1Q91XX8 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC23.61■■□□□ 1.37
Pcdhgb1Q91XX8 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Pcdhgb1Q91XX8 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC23.61■■□□□ 1.37
Pcdhgb1Q91XX8 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Pcdhgb1Q91XX8 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Pcdhgb1Q91XX8 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC23.6■■□□□ 1.37
Pcdhgb1Q91XX8 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
Pcdhgb1Q91XX8 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Pcdhgb1Q91XX8 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC23.59■■□□□ 1.37
Pcdhgb1Q91XX8 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC23.59■■□□□ 1.37
Pcdhgb1Q91XX8 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC23.59■■□□□ 1.37
Pcdhgb1Q91XX8 Gm7332-201ENSMUST00000118351 454 ntBASIC23.58■■□□□ 1.37
Pcdhgb1Q91XX8 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC23.58■■□□□ 1.37
Pcdhgb1Q91XX8 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC23.58■■□□□ 1.37
Pcdhgb1Q91XX8 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Pcdhgb1Q91XX8 AC122428.3-201ENSMUST00000215551 2290 ntBASIC23.57■■□□□ 1.36
Pcdhgb1Q91XX8 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Pcdhgb1Q91XX8 Gm4419-202ENSMUST00000226239 1431 ntBASIC23.57■■□□□ 1.36
Pcdhgb1Q91XX8 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
Pcdhgb1Q91XX8 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Pcdhgb1Q91XX8 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC23.56■■□□□ 1.36
Pcdhgb1Q91XX8 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Pcdhgb1Q91XX8 Gm14523-201ENSMUST00000117260 558 ntBASIC23.55■■□□□ 1.36
Pcdhgb1Q91XX8 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Pcdhgb1Q91XX8 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC23.55■■□□□ 1.36
Pcdhgb1Q91XX8 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC23.54■■□□□ 1.36
Pcdhgb1Q91XX8 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
Pcdhgb1Q91XX8 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC23.53■■□□□ 1.36
Pcdhgb1Q91XX8 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
Pcdhgb1Q91XX8 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Pcdhgb1Q91XX8 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC23.52■■□□□ 1.36
Pcdhgb1Q91XX8 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Pcdhgb1Q91XX8 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Pcdhgb1Q91XX8 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC23.52■■□□□ 1.36
Pcdhgb1Q91XX8 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC23.52■■□□□ 1.36
Pcdhgb1Q91XX8 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Pcdhgb1Q91XX8 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.35
Pcdhgb1Q91XX8 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
Pcdhgb1Q91XX8 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Pcdhgb1Q91XX8 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC23.51■■□□□ 1.35
Pcdhgb1Q91XX8 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC23.51■■□□□ 1.35
Pcdhgb1Q91XX8 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
Pcdhgb1Q91XX8 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC23.51■■□□□ 1.35
Pcdhgb1Q91XX8 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
Pcdhgb1Q91XX8 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Pcdhgb1Q91XX8 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Pcdhgb1Q91XX8 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Pcdhgb1Q91XX8 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Pcdhgb1Q91XX8 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
Pcdhgb1Q91XX8 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
Pcdhgb1Q91XX8 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC23.5■■□□□ 1.35
Pcdhgb1Q91XX8 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC23.49■■□□□ 1.35
Pcdhgb1Q91XX8 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Pcdhgb1Q91XX8 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Pcdhgb1Q91XX8 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Pcdhgb1Q91XX8 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC23.48■■□□□ 1.35
Pcdhgb1Q91XX8 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
Pcdhgb1Q91XX8 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC23.48■■□□□ 1.35
Pcdhgb1Q91XX8 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC23.48■■□□□ 1.35
Pcdhgb1Q91XX8 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC23.48■■□□□ 1.35
Pcdhgb1Q91XX8 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Pcdhgb1Q91XX8 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
Pcdhgb1Q91XX8 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC23.47■■□□□ 1.35
Pcdhgb1Q91XX8 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Pcdhgb1Q91XX8 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Pcdhgb1Q91XX8 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Pcdhgb1Q91XX8 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
Pcdhgb1Q91XX8 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC23.46■■□□□ 1.35
Retrieved 100 of 76,532 protein–RNA pairs in 13.7 ms