Protein–RNA interactions for Protein: Q8K4J2

Ebf4, Transcription factor COE4, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf4Q8K4J2 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ebf4Q8K4J2 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
Ebf4Q8K4J2 Particl-201ENSMUST00000205370 1560 ntBASIC20.83■□□□□ 0.92
Ebf4Q8K4J2 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Ebf4Q8K4J2 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Ebf4Q8K4J2 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ebf4Q8K4J2 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ebf4Q8K4J2 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ebf4Q8K4J2 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ebf4Q8K4J2 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ebf4Q8K4J2 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ebf4Q8K4J2 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Ebf4Q8K4J2 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ebf4Q8K4J2 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ebf4Q8K4J2 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ebf4Q8K4J2 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC20.81■□□□□ 0.92
Ebf4Q8K4J2 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ebf4Q8K4J2 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ebf4Q8K4J2 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ebf4Q8K4J2 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Ebf4Q8K4J2 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Ebf4Q8K4J2 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ebf4Q8K4J2 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC20.79■□□□□ 0.92
Ebf4Q8K4J2 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ebf4Q8K4J2 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Ebf4Q8K4J2 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ebf4Q8K4J2 Gm26766-202ENSMUST00000227544 2347 ntBASIC20.78■□□□□ 0.92
Ebf4Q8K4J2 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ebf4Q8K4J2 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Ebf4Q8K4J2 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ebf4Q8K4J2 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Ebf4Q8K4J2 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ebf4Q8K4J2 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Ebf4Q8K4J2 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ebf4Q8K4J2 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Ebf4Q8K4J2 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC20.76■□□□□ 0.91
Ebf4Q8K4J2 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Ebf4Q8K4J2 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ebf4Q8K4J2 Gm6934-201ENSMUST00000194780 1905 ntBASIC20.76■□□□□ 0.91
Ebf4Q8K4J2 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ebf4Q8K4J2 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Ebf4Q8K4J2 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC20.76■□□□□ 0.91
Ebf4Q8K4J2 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Ebf4Q8K4J2 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC20.76■□□□□ 0.91
Ebf4Q8K4J2 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ebf4Q8K4J2 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ebf4Q8K4J2 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Ebf4Q8K4J2 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ebf4Q8K4J2 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Ebf4Q8K4J2 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
Ebf4Q8K4J2 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ebf4Q8K4J2 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC20.74■□□□□ 0.91
Ebf4Q8K4J2 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC20.74■□□□□ 0.91
Ebf4Q8K4J2 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ebf4Q8K4J2 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Ebf4Q8K4J2 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Ebf4Q8K4J2 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ebf4Q8K4J2 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ebf4Q8K4J2 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC20.72■□□□□ 0.91
Ebf4Q8K4J2 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ebf4Q8K4J2 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC20.71■□□□□ 0.91
Ebf4Q8K4J2 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ebf4Q8K4J2 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ebf4Q8K4J2 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Ebf4Q8K4J2 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ebf4Q8K4J2 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Ebf4Q8K4J2 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ebf4Q8K4J2 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC20.71■□□□□ 0.91
Ebf4Q8K4J2 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC20.71■□□□□ 0.91
Ebf4Q8K4J2 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Ebf4Q8K4J2 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Ebf4Q8K4J2 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC20.7■□□□□ 0.9
Ebf4Q8K4J2 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ebf4Q8K4J2 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ebf4Q8K4J2 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC20.68■□□□□ 0.9
Ebf4Q8K4J2 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC20.68■□□□□ 0.9
Ebf4Q8K4J2 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Ebf4Q8K4J2 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC20.68■□□□□ 0.9
Ebf4Q8K4J2 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ebf4Q8K4J2 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ebf4Q8K4J2 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ebf4Q8K4J2 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ebf4Q8K4J2 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ebf4Q8K4J2 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ebf4Q8K4J2 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ebf4Q8K4J2 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ebf4Q8K4J2 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ebf4Q8K4J2 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Ebf4Q8K4J2 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ebf4Q8K4J2 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ebf4Q8K4J2 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ebf4Q8K4J2 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC20.64■□□□□ 0.9
Ebf4Q8K4J2 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Ebf4Q8K4J2 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Ebf4Q8K4J2 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Ebf4Q8K4J2 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ebf4Q8K4J2 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Ebf4Q8K4J2 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ebf4Q8K4J2 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ebf4Q8K4J2 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 84.3 ms