Protein–RNA interactions for Protein: Q8CE50

Snx30, Sorting nexin-30, mousemouse

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snx30Q8CE50 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC23.26■■□□□ 1.31
Snx30Q8CE50 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Snx30Q8CE50 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Snx30Q8CE50 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Snx30Q8CE50 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Snx30Q8CE50 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC23.25■■□□□ 1.31
Snx30Q8CE50 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC23.25■■□□□ 1.31
Snx30Q8CE50 AC167019.3-201ENSMUST00000228225 1266 ntBASIC23.25■■□□□ 1.31
Snx30Q8CE50 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
Snx30Q8CE50 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC23.24■■□□□ 1.31
Snx30Q8CE50 Gm17641-201ENSMUST00000166328 2350 ntBASIC23.24■■□□□ 1.31
Snx30Q8CE50 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC23.24■■□□□ 1.31
Snx30Q8CE50 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC23.24■■□□□ 1.31
Snx30Q8CE50 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Snx30Q8CE50 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC23.24■■□□□ 1.31
Snx30Q8CE50 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Snx30Q8CE50 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC23.24■■□□□ 1.31
Snx30Q8CE50 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Snx30Q8CE50 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Snx30Q8CE50 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC23.23■■□□□ 1.31
Snx30Q8CE50 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Snx30Q8CE50 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Snx30Q8CE50 Mir3960-201ENSMUST00000198213 73 ntBASIC23.22■■□□□ 1.31
Snx30Q8CE50 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Snx30Q8CE50 AC154454.1-201ENSMUST00000225253 216 ntBASIC23.21■■□□□ 1.31
Snx30Q8CE50 Il17rd-202ENSMUST00000223942 2186 ntBASIC23.21■■□□□ 1.31
Snx30Q8CE50 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
Snx30Q8CE50 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC23.2■■□□□ 1.3
Snx30Q8CE50 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Snx30Q8CE50 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC23.2■■□□□ 1.3
Snx30Q8CE50 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC23.2■■□□□ 1.3
Snx30Q8CE50 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC23.2■■□□□ 1.3
Snx30Q8CE50 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Snx30Q8CE50 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC23.19■■□□□ 1.3
Snx30Q8CE50 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC23.19■■□□□ 1.3
Snx30Q8CE50 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Snx30Q8CE50 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Snx30Q8CE50 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC23.18■■□□□ 1.3
Snx30Q8CE50 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC23.18■■□□□ 1.3
Snx30Q8CE50 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Snx30Q8CE50 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC23.18■■□□□ 1.3
Snx30Q8CE50 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Snx30Q8CE50 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Snx30Q8CE50 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC23.17■■□□□ 1.3
Snx30Q8CE50 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
Snx30Q8CE50 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Snx30Q8CE50 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
Snx30Q8CE50 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC23.16■■□□□ 1.3
Snx30Q8CE50 Gm45364-201ENSMUST00000210883 159 ntBASIC23.16■■□□□ 1.3
Snx30Q8CE50 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Snx30Q8CE50 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Snx30Q8CE50 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
Snx30Q8CE50 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
Snx30Q8CE50 Gm5987-201ENSMUST00000196433 1151 ntBASIC23.15■■□□□ 1.3
Snx30Q8CE50 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
Snx30Q8CE50 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Snx30Q8CE50 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Snx30Q8CE50 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.3
Snx30Q8CE50 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
Snx30Q8CE50 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
Snx30Q8CE50 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.29
Snx30Q8CE50 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC23.13■■□□□ 1.29
Snx30Q8CE50 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Snx30Q8CE50 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC23.13■■□□□ 1.29
Snx30Q8CE50 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Snx30Q8CE50 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Snx30Q8CE50 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Snx30Q8CE50 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC23.13■■□□□ 1.29
Snx30Q8CE50 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Snx30Q8CE50 Gm12818-201ENSMUST00000117562 1349 ntBASIC23.12■■□□□ 1.29
Snx30Q8CE50 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
Snx30Q8CE50 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC23.12■■□□□ 1.29
Snx30Q8CE50 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC23.12■■□□□ 1.29
Snx30Q8CE50 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Snx30Q8CE50 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Snx30Q8CE50 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Snx30Q8CE50 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Snx30Q8CE50 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
Snx30Q8CE50 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC23.11■■□□□ 1.29
Snx30Q8CE50 Gm9812-201ENSMUST00000061934 968 ntBASIC23.11■■□□□ 1.29
Snx30Q8CE50 Gm6311-201ENSMUST00000073790 878 ntBASIC23.11■■□□□ 1.29
Snx30Q8CE50 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Snx30Q8CE50 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC23.1■■□□□ 1.29
Snx30Q8CE50 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Snx30Q8CE50 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC23.1■■□□□ 1.29
Snx30Q8CE50 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Snx30Q8CE50 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC23.09■■□□□ 1.29
Snx30Q8CE50 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Snx30Q8CE50 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Snx30Q8CE50 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
Snx30Q8CE50 AC122317.2-201ENSMUST00000218708 1248 ntBASIC23.08■■□□□ 1.29
Snx30Q8CE50 Pkd1-207ENSMUST00000228550 1050 ntBASIC23.08■■□□□ 1.29
Snx30Q8CE50 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC23.08■■□□□ 1.29
Snx30Q8CE50 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC23.08■■□□□ 1.28
Snx30Q8CE50 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC23.07■■□□□ 1.28
Snx30Q8CE50 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Snx30Q8CE50 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC23.06■■□□□ 1.28
Snx30Q8CE50 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC23.06■■□□□ 1.28
Snx30Q8CE50 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC23.06■■□□□ 1.28
Snx30Q8CE50 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms