Protein–RNA interactions for Protein: Q8C7R2

Gm3411, Predicted gene 3411, mousemouse

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3411Q8C7R2 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
Gm3411Q8C7R2 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
Gm3411Q8C7R2 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
Gm3411Q8C7R2 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Gm3411Q8C7R2 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Gm3411Q8C7R2 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Gm3411Q8C7R2 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC22.51■■□□□ 1.19
Gm3411Q8C7R2 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC22.49■■□□□ 1.19
Gm3411Q8C7R2 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC22.49■■□□□ 1.19
Gm3411Q8C7R2 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Gm3411Q8C7R2 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Gm3411Q8C7R2 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Gm3411Q8C7R2 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Gm3411Q8C7R2 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC22.48■■□□□ 1.19
Gm3411Q8C7R2 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC22.48■■□□□ 1.19
Gm3411Q8C7R2 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Gm3411Q8C7R2 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Gm3411Q8C7R2 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC22.47■■□□□ 1.19
Gm3411Q8C7R2 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Gm3411Q8C7R2 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
Gm3411Q8C7R2 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Gm3411Q8C7R2 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Gm3411Q8C7R2 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Gm3411Q8C7R2 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC22.45■■□□□ 1.18
Gm3411Q8C7R2 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC22.45■■□□□ 1.18
Gm3411Q8C7R2 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Gm3411Q8C7R2 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Gm3411Q8C7R2 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC22.44■■□□□ 1.18
Gm3411Q8C7R2 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Gm3411Q8C7R2 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Gm3411Q8C7R2 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC22.43■■□□□ 1.18
Gm3411Q8C7R2 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Gm3411Q8C7R2 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Gm3411Q8C7R2 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC22.42■■□□□ 1.18
Gm3411Q8C7R2 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Gm3411Q8C7R2 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC22.41■■□□□ 1.18
Gm3411Q8C7R2 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC22.41■■□□□ 1.18
Gm3411Q8C7R2 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC22.41■■□□□ 1.18
Gm3411Q8C7R2 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC22.41■■□□□ 1.18
Gm3411Q8C7R2 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC22.41■■□□□ 1.18
Gm3411Q8C7R2 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Gm3411Q8C7R2 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Gm3411Q8C7R2 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Gm3411Q8C7R2 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC22.4■■□□□ 1.18
Gm3411Q8C7R2 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Gm3411Q8C7R2 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Gm3411Q8C7R2 Scarna2-201ENSMUST00000157560 414 ntBASIC22.4■■□□□ 1.18
Gm3411Q8C7R2 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Gm3411Q8C7R2 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Gm3411Q8C7R2 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Gm3411Q8C7R2 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.17
Gm3411Q8C7R2 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC22.39■■□□□ 1.17
Gm3411Q8C7R2 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Gm3411Q8C7R2 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC22.38■■□□□ 1.17
Gm3411Q8C7R2 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Gm3411Q8C7R2 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC22.38■■□□□ 1.17
Gm3411Q8C7R2 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC22.38■■□□□ 1.17
Gm3411Q8C7R2 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC22.38■■□□□ 1.17
Gm3411Q8C7R2 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Gm3411Q8C7R2 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC22.37■■□□□ 1.17
Gm3411Q8C7R2 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC22.37■■□□□ 1.17
Gm3411Q8C7R2 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC22.37■■□□□ 1.17
Gm3411Q8C7R2 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC22.37■■□□□ 1.17
Gm3411Q8C7R2 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC22.37■■□□□ 1.17
Gm3411Q8C7R2 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Gm3411Q8C7R2 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC22.36■■□□□ 1.17
Gm3411Q8C7R2 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Gm3411Q8C7R2 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC22.36■■□□□ 1.17
Gm3411Q8C7R2 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Gm3411Q8C7R2 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Gm3411Q8C7R2 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC22.35■■□□□ 1.17
Gm3411Q8C7R2 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Gm3411Q8C7R2 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Gm3411Q8C7R2 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC22.35■■□□□ 1.17
Gm3411Q8C7R2 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Gm3411Q8C7R2 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC22.35■■□□□ 1.17
Gm3411Q8C7R2 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Gm3411Q8C7R2 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC22.34■■□□□ 1.17
Gm3411Q8C7R2 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC22.34■■□□□ 1.17
Gm3411Q8C7R2 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Gm3411Q8C7R2 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Gm3411Q8C7R2 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Gm3411Q8C7R2 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Gm3411Q8C7R2 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC22.33■■□□□ 1.17
Gm3411Q8C7R2 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
Gm3411Q8C7R2 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC22.33■■□□□ 1.17
Gm3411Q8C7R2 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC22.33■■□□□ 1.17
Gm3411Q8C7R2 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Gm3411Q8C7R2 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Gm3411Q8C7R2 Gm11687-201ENSMUST00000118911 886 ntBASIC22.32■■□□□ 1.16
Gm3411Q8C7R2 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC22.32■■□□□ 1.16
Gm3411Q8C7R2 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Gm3411Q8C7R2 Gm9806-201ENSMUST00000051080 552 ntBASIC22.32■■□□□ 1.16
Gm3411Q8C7R2 Gm4799-201ENSMUST00000095396 657 ntBASIC22.32■■□□□ 1.16
Gm3411Q8C7R2 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Gm3411Q8C7R2 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
Gm3411Q8C7R2 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Gm3411Q8C7R2 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Gm3411Q8C7R2 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Gm3411Q8C7R2 Gm16437-201ENSMUST00000025669 507 ntBASIC22.3■■□□□ 1.16
Retrieved 100 of 76,532 protein–RNA pairs in 13.1 ms