Protein–RNA interactions for Protein: Q8C1Q6

Smim4, Small integral membrane protein 4, mousemouse

Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim4Q8C1Q6 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Smim4Q8C1Q6 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Smim4Q8C1Q6 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC18.94■□□□□ 0.62
Smim4Q8C1Q6 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Smim4Q8C1Q6 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC18.94■□□□□ 0.62
Smim4Q8C1Q6 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Smim4Q8C1Q6 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Smim4Q8C1Q6 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Smim4Q8C1Q6 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Smim4Q8C1Q6 Gm42699-201ENSMUST00000198104 1657 ntBASIC18.93■□□□□ 0.62
Smim4Q8C1Q6 Gm37136-201ENSMUST00000194368 194 ntBASIC18.93■□□□□ 0.62
Smim4Q8C1Q6 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Smim4Q8C1Q6 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Smim4Q8C1Q6 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Smim4Q8C1Q6 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Smim4Q8C1Q6 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC18.92■□□□□ 0.62
Smim4Q8C1Q6 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Smim4Q8C1Q6 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Smim4Q8C1Q6 Gm9939-201ENSMUST00000067161 1154 ntBASIC18.91■□□□□ 0.62
Smim4Q8C1Q6 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Smim4Q8C1Q6 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Smim4Q8C1Q6 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Smim4Q8C1Q6 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
Smim4Q8C1Q6 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Smim4Q8C1Q6 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC18.9■□□□□ 0.62
Smim4Q8C1Q6 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC18.9■□□□□ 0.62
Smim4Q8C1Q6 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC18.9■□□□□ 0.62
Smim4Q8C1Q6 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC18.89■□□□□ 0.61
Smim4Q8C1Q6 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Smim4Q8C1Q6 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Smim4Q8C1Q6 Gm6821-201ENSMUST00000107540 542 ntBASIC18.88■□□□□ 0.61
Smim4Q8C1Q6 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Smim4Q8C1Q6 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Smim4Q8C1Q6 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC18.88■□□□□ 0.61
Smim4Q8C1Q6 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Smim4Q8C1Q6 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Smim4Q8C1Q6 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Smim4Q8C1Q6 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Smim4Q8C1Q6 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Smim4Q8C1Q6 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Smim4Q8C1Q6 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smim4Q8C1Q6 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Smim4Q8C1Q6 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Smim4Q8C1Q6 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smim4Q8C1Q6 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smim4Q8C1Q6 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Smim4Q8C1Q6 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Smim4Q8C1Q6 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC18.85■□□□□ 0.61
Smim4Q8C1Q6 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC18.85■□□□□ 0.61
Smim4Q8C1Q6 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smim4Q8C1Q6 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smim4Q8C1Q6 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Smim4Q8C1Q6 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Smim4Q8C1Q6 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smim4Q8C1Q6 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Smim4Q8C1Q6 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Smim4Q8C1Q6 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC18.83■□□□□ 0.61
Smim4Q8C1Q6 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Smim4Q8C1Q6 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Smim4Q8C1Q6 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Smim4Q8C1Q6 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC18.83■□□□□ 0.6
Smim4Q8C1Q6 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Smim4Q8C1Q6 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Smim4Q8C1Q6 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
Smim4Q8C1Q6 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Smim4Q8C1Q6 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Smim4Q8C1Q6 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Smim4Q8C1Q6 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Smim4Q8C1Q6 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Smim4Q8C1Q6 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC18.82■□□□□ 0.6
Smim4Q8C1Q6 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Smim4Q8C1Q6 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Smim4Q8C1Q6 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Smim4Q8C1Q6 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC18.81■□□□□ 0.6
Smim4Q8C1Q6 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Smim4Q8C1Q6 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Smim4Q8C1Q6 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Smim4Q8C1Q6 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Smim4Q8C1Q6 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Smim4Q8C1Q6 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Smim4Q8C1Q6 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
Smim4Q8C1Q6 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC18.8■□□□□ 0.6
Smim4Q8C1Q6 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Smim4Q8C1Q6 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Smim4Q8C1Q6 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC18.79■□□□□ 0.6
Smim4Q8C1Q6 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Smim4Q8C1Q6 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC18.78■□□□□ 0.6
Smim4Q8C1Q6 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Smim4Q8C1Q6 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
Smim4Q8C1Q6 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Smim4Q8C1Q6 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.59
Smim4Q8C1Q6 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Smim4Q8C1Q6 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Smim4Q8C1Q6 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Smim4Q8C1Q6 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC18.76■□□□□ 0.59
Smim4Q8C1Q6 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Smim4Q8C1Q6 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Smim4Q8C1Q6 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Smim4Q8C1Q6 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Smim4Q8C1Q6 AC131739.1-201ENSMUST00000221692 1245 ntBASIC18.74■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms