Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Smco3Q8BQM7 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Smco3Q8BQM7 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Smco3Q8BQM7 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Smco3Q8BQM7 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Smco3Q8BQM7 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Smco3Q8BQM7 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC18.62■□□□□ 0.57
Smco3Q8BQM7 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Smco3Q8BQM7 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Smco3Q8BQM7 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Smco3Q8BQM7 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Smco3Q8BQM7 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Smco3Q8BQM7 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Smco3Q8BQM7 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Smco3Q8BQM7 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Smco3Q8BQM7 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Smco3Q8BQM7 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Smco3Q8BQM7 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Smco3Q8BQM7 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Smco3Q8BQM7 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
Smco3Q8BQM7 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Smco3Q8BQM7 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Smco3Q8BQM7 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Smco3Q8BQM7 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Smco3Q8BQM7 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Smco3Q8BQM7 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Smco3Q8BQM7 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Smco3Q8BQM7 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Smco3Q8BQM7 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Smco3Q8BQM7 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC18.59■□□□□ 0.57
Smco3Q8BQM7 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Smco3Q8BQM7 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Smco3Q8BQM7 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Smco3Q8BQM7 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Smco3Q8BQM7 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Smco3Q8BQM7 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Smco3Q8BQM7 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
Smco3Q8BQM7 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Smco3Q8BQM7 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Smco3Q8BQM7 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Smco3Q8BQM7 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Smco3Q8BQM7 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Smco3Q8BQM7 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC18.57■□□□□ 0.56
Smco3Q8BQM7 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Smco3Q8BQM7 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Smco3Q8BQM7 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Smco3Q8BQM7 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Smco3Q8BQM7 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC18.57■□□□□ 0.56
Smco3Q8BQM7 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Smco3Q8BQM7 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Smco3Q8BQM7 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Smco3Q8BQM7 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Smco3Q8BQM7 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Smco3Q8BQM7 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Smco3Q8BQM7 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Smco3Q8BQM7 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
Smco3Q8BQM7 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Smco3Q8BQM7 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC18.55■□□□□ 0.56
Smco3Q8BQM7 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC18.55■□□□□ 0.56
Smco3Q8BQM7 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC18.54■□□□□ 0.56
Smco3Q8BQM7 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Smco3Q8BQM7 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Smco3Q8BQM7 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC18.54■□□□□ 0.56
Smco3Q8BQM7 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Smco3Q8BQM7 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Smco3Q8BQM7 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC18.53■□□□□ 0.56
Smco3Q8BQM7 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Smco3Q8BQM7 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Smco3Q8BQM7 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Smco3Q8BQM7 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC18.53■□□□□ 0.56
Smco3Q8BQM7 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Smco3Q8BQM7 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Smco3Q8BQM7 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Smco3Q8BQM7 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Smco3Q8BQM7 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Smco3Q8BQM7 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC18.52■□□□□ 0.55
Smco3Q8BQM7 Gm37847-201ENSMUST00000192163 1497 ntBASIC18.52■□□□□ 0.55
Smco3Q8BQM7 Gm31748-201ENSMUST00000194938 1497 ntBASIC18.52■□□□□ 0.55
Smco3Q8BQM7 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Smco3Q8BQM7 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Smco3Q8BQM7 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC18.51■□□□□ 0.55
Smco3Q8BQM7 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Smco3Q8BQM7 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Smco3Q8BQM7 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Smco3Q8BQM7 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Smco3Q8BQM7 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Smco3Q8BQM7 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Smco3Q8BQM7 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
Smco3Q8BQM7 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Smco3Q8BQM7 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Smco3Q8BQM7 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Smco3Q8BQM7 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Smco3Q8BQM7 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Smco3Q8BQM7 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Smco3Q8BQM7 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Smco3Q8BQM7 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Smco3Q8BQM7 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Smco3Q8BQM7 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Smco3Q8BQM7 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Smco3Q8BQM7 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 16.2 ms