Protein–RNA interactions for Protein: Q8BME9

Cbln4, Cerebellin-4, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cbln4Q8BME9 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cbln4Q8BME9 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Cbln4Q8BME9 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cbln4Q8BME9 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cbln4Q8BME9 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC19.39■□□□□ 0.69
Cbln4Q8BME9 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC19.39■□□□□ 0.69
Cbln4Q8BME9 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Cbln4Q8BME9 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cbln4Q8BME9 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC19.38■□□□□ 0.69
Cbln4Q8BME9 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cbln4Q8BME9 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cbln4Q8BME9 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cbln4Q8BME9 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cbln4Q8BME9 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cbln4Q8BME9 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cbln4Q8BME9 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Cbln4Q8BME9 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Cbln4Q8BME9 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cbln4Q8BME9 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cbln4Q8BME9 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Cbln4Q8BME9 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cbln4Q8BME9 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cbln4Q8BME9 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
Cbln4Q8BME9 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC19.35■□□□□ 0.69
Cbln4Q8BME9 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Cbln4Q8BME9 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cbln4Q8BME9 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cbln4Q8BME9 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC19.34■□□□□ 0.69
Cbln4Q8BME9 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Cbln4Q8BME9 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Cbln4Q8BME9 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC19.34■□□□□ 0.69
Cbln4Q8BME9 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
Cbln4Q8BME9 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
Cbln4Q8BME9 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Cbln4Q8BME9 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cbln4Q8BME9 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
Cbln4Q8BME9 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cbln4Q8BME9 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Cbln4Q8BME9 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cbln4Q8BME9 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Cbln4Q8BME9 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cbln4Q8BME9 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cbln4Q8BME9 Fezf2-202ENSMUST00000224023 1917 ntBASIC19.31■□□□□ 0.68
Cbln4Q8BME9 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cbln4Q8BME9 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cbln4Q8BME9 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Cbln4Q8BME9 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC19.3■□□□□ 0.68
Cbln4Q8BME9 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Cbln4Q8BME9 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC19.3■□□□□ 0.68
Cbln4Q8BME9 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cbln4Q8BME9 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cbln4Q8BME9 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Cbln4Q8BME9 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC19.29■□□□□ 0.68
Cbln4Q8BME9 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC19.29■□□□□ 0.68
Cbln4Q8BME9 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cbln4Q8BME9 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cbln4Q8BME9 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Cbln4Q8BME9 Gm4419-202ENSMUST00000226239 1431 ntBASIC19.28■□□□□ 0.68
Cbln4Q8BME9 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC19.28■□□□□ 0.68
Cbln4Q8BME9 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cbln4Q8BME9 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Cbln4Q8BME9 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cbln4Q8BME9 AC151971.4-201ENSMUST00000214717 704 ntBASIC19.27■□□□□ 0.68
Cbln4Q8BME9 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cbln4Q8BME9 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Cbln4Q8BME9 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Cbln4Q8BME9 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cbln4Q8BME9 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cbln4Q8BME9 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cbln4Q8BME9 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC19.25■□□□□ 0.67
Cbln4Q8BME9 Gm5067-201ENSMUST00000170449 1009 ntBASIC19.25■□□□□ 0.67
Cbln4Q8BME9 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Cbln4Q8BME9 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Cbln4Q8BME9 Gm20634-201ENSMUST00000090779 2956 ntBASIC19.25■□□□□ 0.67
Cbln4Q8BME9 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cbln4Q8BME9 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cbln4Q8BME9 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC19.24■□□□□ 0.67
Cbln4Q8BME9 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cbln4Q8BME9 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cbln4Q8BME9 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Cbln4Q8BME9 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cbln4Q8BME9 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Cbln4Q8BME9 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Cbln4Q8BME9 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Cbln4Q8BME9 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cbln4Q8BME9 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cbln4Q8BME9 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Cbln4Q8BME9 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cbln4Q8BME9 Gm10420-201ENSMUST00000121713 882 ntBASIC19.22■□□□□ 0.67
Cbln4Q8BME9 Gm44428-201ENSMUST00000204474 874 ntBASIC19.22■□□□□ 0.67
Cbln4Q8BME9 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC19.22■□□□□ 0.67
Cbln4Q8BME9 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cbln4Q8BME9 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC19.21■□□□□ 0.67
Cbln4Q8BME9 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Cbln4Q8BME9 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Cbln4Q8BME9 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cbln4Q8BME9 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cbln4Q8BME9 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cbln4Q8BME9 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Cbln4Q8BME9 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC19.2■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms