Protein–RNA interactions for Protein: Q8BI41

Synb, Syncytin-B, mousemouse

Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SynbQ8BI41 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SynbQ8BI41 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
SynbQ8BI41 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SynbQ8BI41 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
SynbQ8BI41 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
SynbQ8BI41 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SynbQ8BI41 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SynbQ8BI41 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC21.48■■□□□ 1.03
SynbQ8BI41 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
SynbQ8BI41 Gm9812-201ENSMUST00000061934 968 ntBASIC21.48■■□□□ 1.03
SynbQ8BI41 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
SynbQ8BI41 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SynbQ8BI41 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
SynbQ8BI41 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
SynbQ8BI41 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC21.47■■□□□ 1.03
SynbQ8BI41 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SynbQ8BI41 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SynbQ8BI41 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SynbQ8BI41 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
SynbQ8BI41 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
SynbQ8BI41 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
SynbQ8BI41 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SynbQ8BI41 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
SynbQ8BI41 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SynbQ8BI41 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC21.46■■□□□ 1.03
SynbQ8BI41 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
SynbQ8BI41 Gm9910-201ENSMUST00000195385 1550 ntBASIC21.45■■□□□ 1.02
SynbQ8BI41 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
SynbQ8BI41 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
SynbQ8BI41 AC122317.2-201ENSMUST00000218708 1248 ntBASIC21.45■■□□□ 1.02
SynbQ8BI41 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
SynbQ8BI41 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
SynbQ8BI41 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
SynbQ8BI41 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SynbQ8BI41 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SynbQ8BI41 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC21.44■■□□□ 1.02
SynbQ8BI41 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
SynbQ8BI41 Gm17641-201ENSMUST00000166328 2350 ntBASIC21.44■■□□□ 1.02
SynbQ8BI41 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SynbQ8BI41 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SynbQ8BI41 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
SynbQ8BI41 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC21.43■■□□□ 1.02
SynbQ8BI41 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
SynbQ8BI41 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC21.42■■□□□ 1.02
SynbQ8BI41 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
SynbQ8BI41 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
SynbQ8BI41 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
SynbQ8BI41 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
SynbQ8BI41 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
SynbQ8BI41 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SynbQ8BI41 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
SynbQ8BI41 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SynbQ8BI41 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SynbQ8BI41 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC21.39■■□□□ 1.02
SynbQ8BI41 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
SynbQ8BI41 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
SynbQ8BI41 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
SynbQ8BI41 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
SynbQ8BI41 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
SynbQ8BI41 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
SynbQ8BI41 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
SynbQ8BI41 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
SynbQ8BI41 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC21.38■■□□□ 1.01
SynbQ8BI41 Gm5067-201ENSMUST00000170449 1009 ntBASIC21.38■■□□□ 1.01
SynbQ8BI41 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SynbQ8BI41 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
SynbQ8BI41 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC21.37■■□□□ 1.01
SynbQ8BI41 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
SynbQ8BI41 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SynbQ8BI41 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SynbQ8BI41 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
SynbQ8BI41 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC21.35■■□□□ 1.01
SynbQ8BI41 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC21.35■■□□□ 1.01
SynbQ8BI41 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
SynbQ8BI41 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SynbQ8BI41 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC21.35■■□□□ 1.01
SynbQ8BI41 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
SynbQ8BI41 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SynbQ8BI41 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC21.35■■□□□ 1.01
SynbQ8BI41 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC21.35■■□□□ 1.01
SynbQ8BI41 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SynbQ8BI41 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SynbQ8BI41 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SynbQ8BI41 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
SynbQ8BI41 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC21.33■■□□□ 1.01
SynbQ8BI41 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
SynbQ8BI41 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
SynbQ8BI41 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SynbQ8BI41 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC21.32■■□□□ 1
SynbQ8BI41 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC21.32■■□□□ 1
SynbQ8BI41 Gm10420-201ENSMUST00000121713 882 ntBASIC21.32■■□□□ 1
SynbQ8BI41 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC21.32■■□□□ 1
SynbQ8BI41 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC21.32■■□□□ 1
SynbQ8BI41 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC21.32■■□□□ 1
SynbQ8BI41 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SynbQ8BI41 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC21.32■■□□□ 1
SynbQ8BI41 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SynbQ8BI41 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
SynbQ8BI41 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
SynbQ8BI41 AC151971.4-201ENSMUST00000214717 704 ntBASIC21.31■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms