Protein–RNA interactions for Protein: Q8BGX0

Trim23, E3 ubiquitin-protein ligase TRIM23, mousemouse

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim23Q8BGX0 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Trim23Q8BGX0 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
Trim23Q8BGX0 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Trim23Q8BGX0 Gm16437-201ENSMUST00000025669 507 ntBASIC22■■□□□ 1.11
Trim23Q8BGX0 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
Trim23Q8BGX0 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC21.99■■□□□ 1.11
Trim23Q8BGX0 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Trim23Q8BGX0 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC21.99■■□□□ 1.11
Trim23Q8BGX0 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Trim23Q8BGX0 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
Trim23Q8BGX0 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Trim23Q8BGX0 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Trim23Q8BGX0 Gm9910-201ENSMUST00000195385 1550 ntBASIC21.99■■□□□ 1.11
Trim23Q8BGX0 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC21.99■■□□□ 1.11
Trim23Q8BGX0 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC21.99■■□□□ 1.11
Trim23Q8BGX0 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Trim23Q8BGX0 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
Trim23Q8BGX0 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Trim23Q8BGX0 Gm11687-201ENSMUST00000118911 886 ntBASIC21.98■■□□□ 1.11
Trim23Q8BGX0 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Trim23Q8BGX0 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Trim23Q8BGX0 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
Trim23Q8BGX0 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Trim23Q8BGX0 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Trim23Q8BGX0 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Trim23Q8BGX0 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Trim23Q8BGX0 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
Trim23Q8BGX0 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Trim23Q8BGX0 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Trim23Q8BGX0 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Trim23Q8BGX0 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Trim23Q8BGX0 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC21.95■■□□□ 1.1
Trim23Q8BGX0 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Trim23Q8BGX0 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Trim23Q8BGX0 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
Trim23Q8BGX0 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
Trim23Q8BGX0 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC21.94■■□□□ 1.1
Trim23Q8BGX0 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC21.94■■□□□ 1.1
Trim23Q8BGX0 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Trim23Q8BGX0 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC21.93■■□□□ 1.1
Trim23Q8BGX0 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Trim23Q8BGX0 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Trim23Q8BGX0 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Trim23Q8BGX0 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
Trim23Q8BGX0 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Trim23Q8BGX0 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Trim23Q8BGX0 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
Trim23Q8BGX0 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
Trim23Q8BGX0 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Trim23Q8BGX0 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Trim23Q8BGX0 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Trim23Q8BGX0 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.1
Trim23Q8BGX0 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Trim23Q8BGX0 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC21.89■■□□□ 1.09
Trim23Q8BGX0 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.09
Trim23Q8BGX0 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Trim23Q8BGX0 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Trim23Q8BGX0 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Trim23Q8BGX0 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Trim23Q8BGX0 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
Trim23Q8BGX0 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC21.88■■□□□ 1.09
Trim23Q8BGX0 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Trim23Q8BGX0 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Trim23Q8BGX0 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Trim23Q8BGX0 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC21.87■■□□□ 1.09
Trim23Q8BGX0 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Trim23Q8BGX0 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Trim23Q8BGX0 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Trim23Q8BGX0 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC21.86■■□□□ 1.09
Trim23Q8BGX0 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Trim23Q8BGX0 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
Trim23Q8BGX0 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Trim23Q8BGX0 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Trim23Q8BGX0 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
Trim23Q8BGX0 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC21.85■■□□□ 1.09
Trim23Q8BGX0 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
Trim23Q8BGX0 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
Trim23Q8BGX0 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Trim23Q8BGX0 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
Trim23Q8BGX0 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Trim23Q8BGX0 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Trim23Q8BGX0 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Trim23Q8BGX0 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Trim23Q8BGX0 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Trim23Q8BGX0 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Trim23Q8BGX0 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Trim23Q8BGX0 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC21.81■■□□□ 1.08
Trim23Q8BGX0 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Trim23Q8BGX0 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Trim23Q8BGX0 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC21.8■■□□□ 1.08
Trim23Q8BGX0 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Trim23Q8BGX0 AC151971.4-201ENSMUST00000214717 704 ntBASIC21.8■■□□□ 1.08
Trim23Q8BGX0 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
Trim23Q8BGX0 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC21.79■■□□□ 1.08
Trim23Q8BGX0 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC21.79■■□□□ 1.08
Trim23Q8BGX0 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC21.79■■□□□ 1.08
Trim23Q8BGX0 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Trim23Q8BGX0 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC21.78■■□□□ 1.08
Trim23Q8BGX0 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC21.78■■□□□ 1.08
Trim23Q8BGX0 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC21.78■■□□□ 1.08
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms