Protein–RNA interactions for Protein: Q80XG9

Lrrtm4, Leucine-rich repeat transmembrane neuronal protein 4, mousemouse

Predictions only

Length 590 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrtm4Q80XG9 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Lrrtm4Q80XG9 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Lrrtm4Q80XG9 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Lrrtm4Q80XG9 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Lrrtm4Q80XG9 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.15
Lrrtm4Q80XG9 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Lrrtm4Q80XG9 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC22.2■■□□□ 1.14
Lrrtm4Q80XG9 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Lrrtm4Q80XG9 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC22.2■■□□□ 1.14
Lrrtm4Q80XG9 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Lrrtm4Q80XG9 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Lrrtm4Q80XG9 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC22.19■■□□□ 1.14
Lrrtm4Q80XG9 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Lrrtm4Q80XG9 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Lrrtm4Q80XG9 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC22.19■■□□□ 1.14
Lrrtm4Q80XG9 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC22.18■■□□□ 1.14
Lrrtm4Q80XG9 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC22.18■■□□□ 1.14
Lrrtm4Q80XG9 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC22.18■■□□□ 1.14
Lrrtm4Q80XG9 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Lrrtm4Q80XG9 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Lrrtm4Q80XG9 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC22.17■■□□□ 1.14
Lrrtm4Q80XG9 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Lrrtm4Q80XG9 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
Lrrtm4Q80XG9 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
Lrrtm4Q80XG9 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC22.16■■□□□ 1.14
Lrrtm4Q80XG9 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Lrrtm4Q80XG9 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Lrrtm4Q80XG9 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Lrrtm4Q80XG9 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
Lrrtm4Q80XG9 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
Lrrtm4Q80XG9 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Lrrtm4Q80XG9 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC22.15■■□□□ 1.14
Lrrtm4Q80XG9 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Lrrtm4Q80XG9 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
Lrrtm4Q80XG9 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Lrrtm4Q80XG9 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Lrrtm4Q80XG9 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Lrrtm4Q80XG9 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Lrrtm4Q80XG9 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Lrrtm4Q80XG9 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Lrrtm4Q80XG9 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC22.13■■□□□ 1.13
Lrrtm4Q80XG9 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Lrrtm4Q80XG9 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC22.13■■□□□ 1.13
Lrrtm4Q80XG9 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Lrrtm4Q80XG9 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC22.12■■□□□ 1.13
Lrrtm4Q80XG9 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Lrrtm4Q80XG9 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Lrrtm4Q80XG9 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC22.12■■□□□ 1.13
Lrrtm4Q80XG9 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC22.12■■□□□ 1.13
Lrrtm4Q80XG9 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Lrrtm4Q80XG9 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Lrrtm4Q80XG9 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Lrrtm4Q80XG9 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Lrrtm4Q80XG9 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Lrrtm4Q80XG9 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Lrrtm4Q80XG9 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Lrrtm4Q80XG9 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Lrrtm4Q80XG9 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC22.1■■□□□ 1.13
Lrrtm4Q80XG9 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC22.1■■□□□ 1.13
Lrrtm4Q80XG9 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Lrrtm4Q80XG9 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC22.1■■□□□ 1.13
Lrrtm4Q80XG9 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC22.09■■□□□ 1.13
Lrrtm4Q80XG9 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Lrrtm4Q80XG9 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Lrrtm4Q80XG9 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC22.09■■□□□ 1.13
Lrrtm4Q80XG9 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Lrrtm4Q80XG9 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
Lrrtm4Q80XG9 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Lrrtm4Q80XG9 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Lrrtm4Q80XG9 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC22.07■■□□□ 1.12
Lrrtm4Q80XG9 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Lrrtm4Q80XG9 Cap2-205ENSMUST00000225824 1634 ntBASIC22.06■■□□□ 1.12
Lrrtm4Q80XG9 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC22.06■■□□□ 1.12
Lrrtm4Q80XG9 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC22.06■■□□□ 1.12
Lrrtm4Q80XG9 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC22.06■■□□□ 1.12
Lrrtm4Q80XG9 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC22.06■■□□□ 1.12
Lrrtm4Q80XG9 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC22.06■■□□□ 1.12
Lrrtm4Q80XG9 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC22.06■■□□□ 1.12
Lrrtm4Q80XG9 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
Lrrtm4Q80XG9 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Lrrtm4Q80XG9 Gm27502-201ENSMUST00000183495 199 ntBASIC22.05■■□□□ 1.12
Lrrtm4Q80XG9 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC22.05■■□□□ 1.12
Lrrtm4Q80XG9 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Lrrtm4Q80XG9 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC22.05■■□□□ 1.12
Lrrtm4Q80XG9 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Lrrtm4Q80XG9 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Lrrtm4Q80XG9 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC22.04■■□□□ 1.12
Lrrtm4Q80XG9 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Lrrtm4Q80XG9 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC22.04■■□□□ 1.12
Lrrtm4Q80XG9 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC22.03■■□□□ 1.12
Lrrtm4Q80XG9 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC22.03■■□□□ 1.12
Lrrtm4Q80XG9 Gm12366-201ENSMUST00000121722 873 ntBASIC22.03■■□□□ 1.12
Lrrtm4Q80XG9 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC22.03■■□□□ 1.12
Lrrtm4Q80XG9 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC22.03■■□□□ 1.12
Lrrtm4Q80XG9 Gm5786-201ENSMUST00000085368 882 ntBASIC22.03■■□□□ 1.12
Lrrtm4Q80XG9 AC153890.1-201ENSMUST00000220021 2469 ntBASIC22.03■■□□□ 1.12
Lrrtm4Q80XG9 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC22.02■■□□□ 1.12
Lrrtm4Q80XG9 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Lrrtm4Q80XG9 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC22.02■■□□□ 1.12
Lrrtm4Q80XG9 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms