Protein–RNA interactions for Protein: Q80VK6

Arhgef38, Rho guanine nucleotide exchange factor 38, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Arhgef38Q80VK6 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Arhgef38Q80VK6 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC22.61■■□□□ 1.21
Arhgef38Q80VK6 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Arhgef38Q80VK6 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Arhgef38Q80VK6 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Arhgef38Q80VK6 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC22.6■■□□□ 1.21
Arhgef38Q80VK6 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Arhgef38Q80VK6 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Arhgef38Q80VK6 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Arhgef38Q80VK6 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Arhgef38Q80VK6 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC22.6■■□□□ 1.21
Arhgef38Q80VK6 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
Arhgef38Q80VK6 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC22.58■■□□□ 1.21
Arhgef38Q80VK6 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Arhgef38Q80VK6 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC22.58■■□□□ 1.21
Arhgef38Q80VK6 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Arhgef38Q80VK6 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC22.57■■□□□ 1.2
Arhgef38Q80VK6 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Arhgef38Q80VK6 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC22.57■■□□□ 1.2
Arhgef38Q80VK6 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Arhgef38Q80VK6 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Arhgef38Q80VK6 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Arhgef38Q80VK6 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC22.56■■□□□ 1.2
Arhgef38Q80VK6 Mir3960-201ENSMUST00000198213 73 ntBASIC22.56■■□□□ 1.2
Arhgef38Q80VK6 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Arhgef38Q80VK6 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Arhgef38Q80VK6 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC22.56■■□□□ 1.2
Arhgef38Q80VK6 AC154454.1-201ENSMUST00000225253 216 ntBASIC22.55■■□□□ 1.2
Arhgef38Q80VK6 Gm42699-201ENSMUST00000198104 1657 ntBASIC22.55■■□□□ 1.2
Arhgef38Q80VK6 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
Arhgef38Q80VK6 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Arhgef38Q80VK6 Gm45364-201ENSMUST00000210883 159 ntBASIC22.54■■□□□ 1.2
Arhgef38Q80VK6 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
Arhgef38Q80VK6 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC22.53■■□□□ 1.2
Arhgef38Q80VK6 AC167019.3-201ENSMUST00000228225 1266 ntBASIC22.53■■□□□ 1.2
Arhgef38Q80VK6 Gm9812-201ENSMUST00000061934 968 ntBASIC22.53■■□□□ 1.2
Arhgef38Q80VK6 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Arhgef38Q80VK6 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Arhgef38Q80VK6 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Arhgef38Q80VK6 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Arhgef38Q80VK6 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Arhgef38Q80VK6 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Arhgef38Q80VK6 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Arhgef38Q80VK6 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC22.52■■□□□ 1.2
Arhgef38Q80VK6 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC22.52■■□□□ 1.2
Arhgef38Q80VK6 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Arhgef38Q80VK6 Gm12818-201ENSMUST00000117562 1349 ntBASIC22.52■■□□□ 1.2
Arhgef38Q80VK6 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC22.51■■□□□ 1.19
Arhgef38Q80VK6 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Arhgef38Q80VK6 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Arhgef38Q80VK6 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC22.51■■□□□ 1.19
Arhgef38Q80VK6 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Arhgef38Q80VK6 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Arhgef38Q80VK6 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Arhgef38Q80VK6 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC22.49■■□□□ 1.19
Arhgef38Q80VK6 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC22.49■■□□□ 1.19
Arhgef38Q80VK6 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
Arhgef38Q80VK6 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Arhgef38Q80VK6 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC22.49■■□□□ 1.19
Arhgef38Q80VK6 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Arhgef38Q80VK6 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Arhgef38Q80VK6 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC22.48■■□□□ 1.19
Arhgef38Q80VK6 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC22.48■■□□□ 1.19
Arhgef38Q80VK6 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC22.48■■□□□ 1.19
Arhgef38Q80VK6 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Arhgef38Q80VK6 AC122317.2-201ENSMUST00000218708 1248 ntBASIC22.48■■□□□ 1.19
Arhgef38Q80VK6 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Arhgef38Q80VK6 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC22.48■■□□□ 1.19
Arhgef38Q80VK6 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Arhgef38Q80VK6 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Arhgef38Q80VK6 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC22.47■■□□□ 1.19
Arhgef38Q80VK6 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Arhgef38Q80VK6 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Arhgef38Q80VK6 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Arhgef38Q80VK6 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Arhgef38Q80VK6 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC22.46■■□□□ 1.19
Arhgef38Q80VK6 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.19
Arhgef38Q80VK6 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC22.45■■□□□ 1.18
Arhgef38Q80VK6 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Arhgef38Q80VK6 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Arhgef38Q80VK6 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Arhgef38Q80VK6 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Arhgef38Q80VK6 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC22.43■■□□□ 1.18
Arhgef38Q80VK6 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC22.43■■□□□ 1.18
Arhgef38Q80VK6 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC22.43■■□□□ 1.18
Arhgef38Q80VK6 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC22.43■■□□□ 1.18
Arhgef38Q80VK6 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Arhgef38Q80VK6 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Arhgef38Q80VK6 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC22.42■■□□□ 1.18
Arhgef38Q80VK6 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC22.42■■□□□ 1.18
Arhgef38Q80VK6 AC153911.1-201ENSMUST00000220378 758 ntBASIC22.42■■□□□ 1.18
Arhgef38Q80VK6 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Arhgef38Q80VK6 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Arhgef38Q80VK6 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Arhgef38Q80VK6 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Arhgef38Q80VK6 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Arhgef38Q80VK6 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Arhgef38Q80VK6 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC22.4■■□□□ 1.18
Arhgef38Q80VK6 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Arhgef38Q80VK6 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Retrieved 100 of 76,532 protein–RNA pairs in 10.9 ms