Protein–RNA interactions for Protein: Q80T79

Csmd3, CUB and sushi domain-containing protein 3, mousemouse

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Csmd3Q80T79 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Csmd3Q80T79 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC16.13■□□□□ 0.17
Csmd3Q80T79 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
Csmd3Q80T79 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC16.13■□□□□ 0.17
Csmd3Q80T79 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Csmd3Q80T79 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC16.12■□□□□ 0.17
Csmd3Q80T79 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC16.12■□□□□ 0.17
Csmd3Q80T79 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC16.12■□□□□ 0.17
Csmd3Q80T79 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Csmd3Q80T79 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Csmd3Q80T79 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Csmd3Q80T79 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Csmd3Q80T79 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Csmd3Q80T79 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC16.11■□□□□ 0.17
Csmd3Q80T79 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Csmd3Q80T79 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Csmd3Q80T79 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
Csmd3Q80T79 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
Csmd3Q80T79 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
Csmd3Q80T79 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Csmd3Q80T79 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Csmd3Q80T79 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Csmd3Q80T79 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC16.09■□□□□ 0.17
Csmd3Q80T79 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Csmd3Q80T79 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Csmd3Q80T79 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC16.08■□□□□ 0.16
Csmd3Q80T79 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC16.08■□□□□ 0.16
Csmd3Q80T79 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Csmd3Q80T79 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC16.08■□□□□ 0.16
Csmd3Q80T79 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Csmd3Q80T79 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC16.08■□□□□ 0.16
Csmd3Q80T79 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC16.08■□□□□ 0.16
Csmd3Q80T79 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Csmd3Q80T79 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Csmd3Q80T79 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Csmd3Q80T79 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Csmd3Q80T79 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Csmd3Q80T79 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Csmd3Q80T79 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Csmd3Q80T79 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Csmd3Q80T79 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC16.06■□□□□ 0.16
Csmd3Q80T79 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Csmd3Q80T79 Gm9959-201ENSMUST00000068277 390 ntBASIC16.06■□□□□ 0.16
Csmd3Q80T79 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Csmd3Q80T79 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Csmd3Q80T79 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Csmd3Q80T79 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Csmd3Q80T79 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Csmd3Q80T79 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Csmd3Q80T79 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Csmd3Q80T79 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Csmd3Q80T79 Nsd1-203ENSMUST00000224156 1149 ntBASIC16.04■□□□□ 0.16
Csmd3Q80T79 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Csmd3Q80T79 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Csmd3Q80T79 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC16.03■□□□□ 0.16
Csmd3Q80T79 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Csmd3Q80T79 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Csmd3Q80T79 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
Csmd3Q80T79 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC16.02■□□□□ 0.15
Csmd3Q80T79 Serp2-204ENSMUST00000228055 705 ntBASIC16.02■□□□□ 0.15
Csmd3Q80T79 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC16.02■□□□□ 0.15
Csmd3Q80T79 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.15
Csmd3Q80T79 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Csmd3Q80T79 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC16.01■□□□□ 0.15
Csmd3Q80T79 Gm14121-201ENSMUST00000121441 1380 ntBASIC16.01■□□□□ 0.15
Csmd3Q80T79 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Csmd3Q80T79 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Csmd3Q80T79 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Csmd3Q80T79 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Csmd3Q80T79 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC16■□□□□ 0.15
Csmd3Q80T79 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC16■□□□□ 0.15
Csmd3Q80T79 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC16■□□□□ 0.15
Csmd3Q80T79 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Csmd3Q80T79 Gm45444-201ENSMUST00000211394 898 ntBASIC16■□□□□ 0.15
Csmd3Q80T79 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Csmd3Q80T79 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Csmd3Q80T79 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC15.99■□□□□ 0.15
Csmd3Q80T79 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Csmd3Q80T79 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Csmd3Q80T79 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC15.99■□□□□ 0.15
Csmd3Q80T79 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Csmd3Q80T79 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Csmd3Q80T79 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Csmd3Q80T79 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Csmd3Q80T79 Terc-201ENSMUST00000082862 423 ntBASIC15.97■□□□□ 0.15
Csmd3Q80T79 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Csmd3Q80T79 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Csmd3Q80T79 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Csmd3Q80T79 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
Csmd3Q80T79 Gm43592-201ENSMUST00000196922 1165 ntBASIC15.96■□□□□ 0.15
Csmd3Q80T79 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Csmd3Q80T79 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC15.96■□□□□ 0.15
Csmd3Q80T79 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Csmd3Q80T79 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Csmd3Q80T79 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC15.95■□□□□ 0.14
Csmd3Q80T79 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC15.95■□□□□ 0.14
Csmd3Q80T79 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Csmd3Q80T79 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC15.95■□□□□ 0.14
Csmd3Q80T79 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
Csmd3Q80T79 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms