Protein–RNA interactions for Protein: Q7TN05

Ap1s3, AP-1 complex subunit sigma-3, mousemouse

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ap1s3Q7TN05 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Ap1s3Q7TN05 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Ap1s3Q7TN05 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Ap1s3Q7TN05 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ap1s3Q7TN05 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ap1s3Q7TN05 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ap1s3Q7TN05 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ap1s3Q7TN05 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ap1s3Q7TN05 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ap1s3Q7TN05 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
Ap1s3Q7TN05 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Ap1s3Q7TN05 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ap1s3Q7TN05 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Ap1s3Q7TN05 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC19.83■□□□□ 0.76
Ap1s3Q7TN05 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Ap1s3Q7TN05 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Ap1s3Q7TN05 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ap1s3Q7TN05 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ap1s3Q7TN05 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Ap1s3Q7TN05 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ap1s3Q7TN05 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ap1s3Q7TN05 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ap1s3Q7TN05 Peli2-204ENSMUST00000226513 1320 ntBASIC19.8■□□□□ 0.76
Ap1s3Q7TN05 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Ap1s3Q7TN05 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC19.8■□□□□ 0.76
Ap1s3Q7TN05 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ap1s3Q7TN05 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ap1s3Q7TN05 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ap1s3Q7TN05 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ap1s3Q7TN05 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ap1s3Q7TN05 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Ap1s3Q7TN05 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Ap1s3Q7TN05 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Ap1s3Q7TN05 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ap1s3Q7TN05 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ap1s3Q7TN05 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Ap1s3Q7TN05 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ap1s3Q7TN05 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ap1s3Q7TN05 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ap1s3Q7TN05 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ap1s3Q7TN05 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.75
Ap1s3Q7TN05 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Ap1s3Q7TN05 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC19.76■□□□□ 0.75
Ap1s3Q7TN05 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Ap1s3Q7TN05 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC19.76■□□□□ 0.75
Ap1s3Q7TN05 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC19.76■□□□□ 0.75
Ap1s3Q7TN05 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ap1s3Q7TN05 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ap1s3Q7TN05 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Ap1s3Q7TN05 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Ap1s3Q7TN05 Gm17082-201ENSMUST00000166043 1091 ntBASIC19.75■□□□□ 0.75
Ap1s3Q7TN05 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Ap1s3Q7TN05 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ap1s3Q7TN05 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC19.74■□□□□ 0.75
Ap1s3Q7TN05 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Ap1s3Q7TN05 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ap1s3Q7TN05 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ap1s3Q7TN05 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ap1s3Q7TN05 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Ap1s3Q7TN05 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Ap1s3Q7TN05 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC19.73■□□□□ 0.75
Ap1s3Q7TN05 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ap1s3Q7TN05 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ap1s3Q7TN05 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ap1s3Q7TN05 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Ap1s3Q7TN05 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ap1s3Q7TN05 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Ap1s3Q7TN05 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Ap1s3Q7TN05 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ap1s3Q7TN05 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Ap1s3Q7TN05 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ap1s3Q7TN05 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Ap1s3Q7TN05 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ap1s3Q7TN05 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ap1s3Q7TN05 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ap1s3Q7TN05 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Ap1s3Q7TN05 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ap1s3Q7TN05 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ap1s3Q7TN05 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Ap1s3Q7TN05 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Ap1s3Q7TN05 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Ap1s3Q7TN05 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ap1s3Q7TN05 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Ap1s3Q7TN05 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Ap1s3Q7TN05 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ap1s3Q7TN05 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ap1s3Q7TN05 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ap1s3Q7TN05 H3f3aos-201ENSMUST00000097448 2905 ntBASIC19.68■□□□□ 0.74
Ap1s3Q7TN05 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ap1s3Q7TN05 Gm20634-201ENSMUST00000090779 2956 ntBASIC19.67■□□□□ 0.74
Ap1s3Q7TN05 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Ap1s3Q7TN05 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ap1s3Q7TN05 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ap1s3Q7TN05 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ap1s3Q7TN05 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC19.66■□□□□ 0.74
Ap1s3Q7TN05 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ap1s3Q7TN05 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Ap1s3Q7TN05 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Ap1s3Q7TN05 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ap1s3Q7TN05 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms