Protein–RNA interactions for Protein: Q64739

Col11a2, Collagen alpha-2(XI) chain, mousemouse

Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a2Q64739 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC28.83■■■□□ 2.21
Col11a2Q64739 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC28.82■■■□□ 2.2
Col11a2Q64739 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC28.81■■■□□ 2.2
Col11a2Q64739 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC28.8■■■□□ 2.2
Col11a2Q64739 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC28.8■■■□□ 2.2
Col11a2Q64739 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC28.8■■■□□ 2.2
Col11a2Q64739 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC28.77■■■□□ 2.2
Col11a2Q64739 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
Col11a2Q64739 Gm14117-201ENSMUST00000122417 843 ntBASIC28.77■■■□□ 2.2
Col11a2Q64739 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
Col11a2Q64739 Gm44428-201ENSMUST00000204474 874 ntBASIC28.77■■■□□ 2.2
Col11a2Q64739 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
Col11a2Q64739 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.2
Col11a2Q64739 Gm45444-201ENSMUST00000211394 898 ntBASIC28.75■■■□□ 2.19
Col11a2Q64739 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC28.75■■■□□ 2.19
Col11a2Q64739 Rps24-207ENSMUST00000224568 714 ntBASIC28.74■■■□□ 2.19
Col11a2Q64739 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
Col11a2Q64739 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
Col11a2Q64739 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC28.74■■■□□ 2.19
Col11a2Q64739 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC28.74■■■□□ 2.19
Col11a2Q64739 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC28.74■■■□□ 2.19
Col11a2Q64739 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC28.73■■■□□ 2.19
Col11a2Q64739 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
Col11a2Q64739 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC28.72■■■□□ 2.19
Col11a2Q64739 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
Col11a2Q64739 Gm43592-201ENSMUST00000196922 1165 ntBASIC28.72■■■□□ 2.19
Col11a2Q64739 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.19
Col11a2Q64739 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC28.7■■■□□ 2.19
Col11a2Q64739 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC28.69■■■□□ 2.18
Col11a2Q64739 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
Col11a2Q64739 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC28.67■■■□□ 2.18
Col11a2Q64739 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC28.66■■■□□ 2.18
Col11a2Q64739 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
Col11a2Q64739 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC28.66■■■□□ 2.18
Col11a2Q64739 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
Col11a2Q64739 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
Col11a2Q64739 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC28.64■■■□□ 2.18
Col11a2Q64739 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC28.64■■■□□ 2.18
Col11a2Q64739 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC28.64■■■□□ 2.18
Col11a2Q64739 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC28.63■■■□□ 2.17
Col11a2Q64739 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC28.63■■■□□ 2.17
Col11a2Q64739 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC28.63■■■□□ 2.17
Col11a2Q64739 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
Col11a2Q64739 Zxda-201ENSMUST00000117281 2621 ntBASIC28.61■■■□□ 2.17
Col11a2Q64739 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
Col11a2Q64739 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
Col11a2Q64739 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC28.6■■■□□ 2.17
Col11a2Q64739 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
Col11a2Q64739 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
Col11a2Q64739 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC28.6■■■□□ 2.17
Col11a2Q64739 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC28.59■■■□□ 2.17
Col11a2Q64739 Nsd1-203ENSMUST00000224156 1149 ntBASIC28.59■■■□□ 2.17
Col11a2Q64739 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC28.59■■■□□ 2.17
Col11a2Q64739 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
Col11a2Q64739 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC28.58■■■□□ 2.17
Col11a2Q64739 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC28.58■■■□□ 2.17
Col11a2Q64739 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
Col11a2Q64739 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
Col11a2Q64739 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC28.57■■■□□ 2.16
Col11a2Q64739 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC28.57■■■□□ 2.16
Col11a2Q64739 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
Col11a2Q64739 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC28.57■■■□□ 2.16
Col11a2Q64739 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC28.56■■■□□ 2.16
Col11a2Q64739 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC28.56■■■□□ 2.16
Col11a2Q64739 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC28.56■■■□□ 2.16
Col11a2Q64739 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC28.55■■■□□ 2.16
Col11a2Q64739 Gm45102-201ENSMUST00000207427 857 ntBASIC28.55■■■□□ 2.16
Col11a2Q64739 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
Col11a2Q64739 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
Col11a2Q64739 Gm37847-201ENSMUST00000192163 1497 ntBASIC28.54■■■□□ 2.16
Col11a2Q64739 Gm31748-201ENSMUST00000194938 1497 ntBASIC28.54■■■□□ 2.16
Col11a2Q64739 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC28.54■■■□□ 2.16
Col11a2Q64739 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC28.54■■■□□ 2.16
Col11a2Q64739 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
Col11a2Q64739 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC28.53■■■□□ 2.16
Col11a2Q64739 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
Col11a2Q64739 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC28.53■■■□□ 2.16
Col11a2Q64739 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC28.53■■■□□ 2.16
Col11a2Q64739 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC28.52■■■□□ 2.16
Col11a2Q64739 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
Col11a2Q64739 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC28.52■■■□□ 2.16
Col11a2Q64739 Gm43445-201ENSMUST00000198564 2091 ntBASIC28.52■■■□□ 2.16
Col11a2Q64739 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
Col11a2Q64739 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
Col11a2Q64739 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC28.51■■■□□ 2.15
Col11a2Q64739 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC28.51■■■□□ 2.15
Col11a2Q64739 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC28.5■■■□□ 2.15
Col11a2Q64739 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC28.49■■■□□ 2.15
Col11a2Q64739 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC28.49■■■□□ 2.15
Col11a2Q64739 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC28.49■■■□□ 2.15
Col11a2Q64739 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
Col11a2Q64739 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC28.49■■■□□ 2.15
Col11a2Q64739 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
Col11a2Q64739 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC28.48■■■□□ 2.15
Col11a2Q64739 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
Col11a2Q64739 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
Col11a2Q64739 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
Col11a2Q64739 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC28.47■■■□□ 2.15
Col11a2Q64739 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
Col11a2Q64739 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC28.46■■■□□ 2.15
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms