Protein–RNA interactions for Protein: Q63739

Ptp4a1, Protein tyrosine phosphatase type IVA 1, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptp4a1Q63739 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Ptp4a1Q63739 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Ptp4a1Q63739 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ptp4a1Q63739 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ptp4a1Q63739 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ptp4a1Q63739 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ptp4a1Q63739 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC20.42■□□□□ 0.86
Ptp4a1Q63739 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Ptp4a1Q63739 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ptp4a1Q63739 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ptp4a1Q63739 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ptp4a1Q63739 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ptp4a1Q63739 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ptp4a1Q63739 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ptp4a1Q63739 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ptp4a1Q63739 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC20.4■□□□□ 0.86
Ptp4a1Q63739 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
Ptp4a1Q63739 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Ptp4a1Q63739 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
Ptp4a1Q63739 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ptp4a1Q63739 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Ptp4a1Q63739 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC20.38■□□□□ 0.85
Ptp4a1Q63739 Gm17641-201ENSMUST00000166328 2350 ntBASIC20.38■□□□□ 0.85
Ptp4a1Q63739 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ptp4a1Q63739 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC20.38■□□□□ 0.85
Ptp4a1Q63739 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Ptp4a1Q63739 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ptp4a1Q63739 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ptp4a1Q63739 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ptp4a1Q63739 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ptp4a1Q63739 Gm6821-201ENSMUST00000107540 542 ntBASIC20.37■□□□□ 0.85
Ptp4a1Q63739 Gm37136-201ENSMUST00000194368 194 ntBASIC20.37■□□□□ 0.85
Ptp4a1Q63739 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ptp4a1Q63739 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Ptp4a1Q63739 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC20.36■□□□□ 0.85
Ptp4a1Q63739 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Ptp4a1Q63739 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Ptp4a1Q63739 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ptp4a1Q63739 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Ptp4a1Q63739 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ptp4a1Q63739 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Ptp4a1Q63739 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ptp4a1Q63739 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ptp4a1Q63739 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC20.34■□□□□ 0.85
Ptp4a1Q63739 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Ptp4a1Q63739 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ptp4a1Q63739 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Ptp4a1Q63739 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ptp4a1Q63739 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ptp4a1Q63739 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ptp4a1Q63739 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
Ptp4a1Q63739 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC20.33■□□□□ 0.85
Ptp4a1Q63739 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Ptp4a1Q63739 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Ptp4a1Q63739 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC20.32■□□□□ 0.84
Ptp4a1Q63739 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC20.32■□□□□ 0.84
Ptp4a1Q63739 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC20.32■□□□□ 0.84
Ptp4a1Q63739 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ptp4a1Q63739 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ptp4a1Q63739 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ptp4a1Q63739 Gm8503-201ENSMUST00000118131 455 ntBASIC20.31■□□□□ 0.84
Ptp4a1Q63739 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ptp4a1Q63739 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Ptp4a1Q63739 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ptp4a1Q63739 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC20.31■□□□□ 0.84
Ptp4a1Q63739 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Ptp4a1Q63739 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ptp4a1Q63739 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Ptp4a1Q63739 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
Ptp4a1Q63739 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ptp4a1Q63739 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ptp4a1Q63739 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ptp4a1Q63739 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ptp4a1Q63739 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Ptp4a1Q63739 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ptp4a1Q63739 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ptp4a1Q63739 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ptp4a1Q63739 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ptp4a1Q63739 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Ptp4a1Q63739 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ptp4a1Q63739 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC20.27■□□□□ 0.84
Ptp4a1Q63739 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC20.27■□□□□ 0.84
Ptp4a1Q63739 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC20.27■□□□□ 0.84
Ptp4a1Q63739 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC20.27■□□□□ 0.84
Ptp4a1Q63739 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC20.27■□□□□ 0.84
Ptp4a1Q63739 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Ptp4a1Q63739 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ptp4a1Q63739 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Ptp4a1Q63739 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Ptp4a1Q63739 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Ptp4a1Q63739 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ptp4a1Q63739 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC20.26■□□□□ 0.83
Ptp4a1Q63739 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ptp4a1Q63739 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC20.25■□□□□ 0.83
Ptp4a1Q63739 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Ptp4a1Q63739 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Ptp4a1Q63739 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Ptp4a1Q63739 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Ptp4a1Q63739 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Ptp4a1Q63739 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms