Protein–RNA interactions for Protein: Q571H0

Urb1, Nucleolar pre-ribosomal-associated protein 1, mousemouse

Known RBP Predictions only

Length 2,274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Urb1Q571H0 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Urb1Q571H0 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC21.06■□□□□ 0.96
Urb1Q571H0 Gm43566-201ENSMUST00000196851 808 ntBASIC21.06■□□□□ 0.96
Urb1Q571H0 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Urb1Q571H0 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC21.06■□□□□ 0.96
Urb1Q571H0 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Urb1Q571H0 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
Urb1Q571H0 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
Urb1Q571H0 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC21.05■□□□□ 0.96
Urb1Q571H0 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC21.05■□□□□ 0.96
Urb1Q571H0 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Urb1Q571H0 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Urb1Q571H0 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Urb1Q571H0 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Urb1Q571H0 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Urb1Q571H0 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Urb1Q571H0 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC21.04■□□□□ 0.96
Urb1Q571H0 Rps24-207ENSMUST00000224568 714 ntBASIC21.03■□□□□ 0.96
Urb1Q571H0 Gm13238-201ENSMUST00000117655 780 ntBASIC21.03■□□□□ 0.96
Urb1Q571H0 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC21.03■□□□□ 0.96
Urb1Q571H0 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC21.03■□□□□ 0.96
Urb1Q571H0 AC153911.1-201ENSMUST00000220378 758 ntBASIC21.03■□□□□ 0.96
Urb1Q571H0 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
Urb1Q571H0 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Urb1Q571H0 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Urb1Q571H0 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC21.02■□□□□ 0.96
Urb1Q571H0 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Urb1Q571H0 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC21.02■□□□□ 0.96
Urb1Q571H0 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Urb1Q571H0 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Urb1Q571H0 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC21.02■□□□□ 0.96
Urb1Q571H0 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
Urb1Q571H0 Gm15820-201ENSMUST00000201566 728 ntBASIC21.02■□□□□ 0.95
Urb1Q571H0 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
Urb1Q571H0 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Urb1Q571H0 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Urb1Q571H0 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC21.01■□□□□ 0.95
Urb1Q571H0 Gm14121-201ENSMUST00000121441 1380 ntBASIC21.01■□□□□ 0.95
Urb1Q571H0 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Urb1Q571H0 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Urb1Q571H0 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC20.99■□□□□ 0.95
Urb1Q571H0 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Urb1Q571H0 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Urb1Q571H0 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Urb1Q571H0 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Urb1Q571H0 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
Urb1Q571H0 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Urb1Q571H0 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Urb1Q571H0 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Urb1Q571H0 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Urb1Q571H0 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Urb1Q571H0 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
Urb1Q571H0 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Urb1Q571H0 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Urb1Q571H0 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC20.96■□□□□ 0.95
Urb1Q571H0 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Urb1Q571H0 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC20.95■□□□□ 0.95
Urb1Q571H0 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.95
Urb1Q571H0 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Urb1Q571H0 Gm45102-201ENSMUST00000207427 857 ntBASIC20.95■□□□□ 0.94
Urb1Q571H0 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
Urb1Q571H0 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC20.94■□□□□ 0.94
Urb1Q571H0 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC20.93■□□□□ 0.94
Urb1Q571H0 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC20.93■□□□□ 0.94
Urb1Q571H0 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Urb1Q571H0 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Urb1Q571H0 Gm44428-201ENSMUST00000204474 874 ntBASIC20.93■□□□□ 0.94
Urb1Q571H0 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Urb1Q571H0 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Urb1Q571H0 Gm43592-201ENSMUST00000196922 1165 ntBASIC20.92■□□□□ 0.94
Urb1Q571H0 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC20.92■□□□□ 0.94
Urb1Q571H0 Gm9959-201ENSMUST00000068277 390 ntBASIC20.92■□□□□ 0.94
Urb1Q571H0 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Urb1Q571H0 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC20.92■□□□□ 0.94
Urb1Q571H0 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC20.91■□□□□ 0.94
Urb1Q571H0 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Urb1Q571H0 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Urb1Q571H0 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Urb1Q571H0 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC20.9■□□□□ 0.94
Urb1Q571H0 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Urb1Q571H0 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.94
Urb1Q571H0 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Urb1Q571H0 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Urb1Q571H0 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Urb1Q571H0 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Urb1Q571H0 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Urb1Q571H0 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Urb1Q571H0 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Urb1Q571H0 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC20.87■□□□□ 0.93
Urb1Q571H0 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Urb1Q571H0 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Urb1Q571H0 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Urb1Q571H0 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Urb1Q571H0 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Urb1Q571H0 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
Urb1Q571H0 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
Urb1Q571H0 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Urb1Q571H0 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Urb1Q571H0 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC20.85■□□□□ 0.93
Urb1Q571H0 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 168.7 ms