Protein–RNA interactions for Protein: Q3ULF4

Spg7, Paraplegin, mousemouse

Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg7Q3ULF4 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC27.45■■□□□ 1.99
Spg7Q3ULF4 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC27.45■■□□□ 1.98
Spg7Q3ULF4 Gm5067-201ENSMUST00000170449 1009 ntBASIC27.45■■□□□ 1.98
Spg7Q3ULF4 Gm44428-201ENSMUST00000204474 874 ntBASIC27.45■■□□□ 1.98
Spg7Q3ULF4 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
Spg7Q3ULF4 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC27.45■■□□□ 1.98
Spg7Q3ULF4 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
Spg7Q3ULF4 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
Spg7Q3ULF4 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC27.44■■□□□ 1.98
Spg7Q3ULF4 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
Spg7Q3ULF4 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
Spg7Q3ULF4 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC27.44■■□□□ 1.98
Spg7Q3ULF4 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
Spg7Q3ULF4 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC27.44■■□□□ 1.98
Spg7Q3ULF4 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC27.43■■□□□ 1.98
Spg7Q3ULF4 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
Spg7Q3ULF4 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC27.42■■□□□ 1.98
Spg7Q3ULF4 Gm10420-201ENSMUST00000121713 882 ntBASIC27.42■■□□□ 1.98
Spg7Q3ULF4 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC27.42■■□□□ 1.98
Spg7Q3ULF4 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
Spg7Q3ULF4 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
Spg7Q3ULF4 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC27.4■■□□□ 1.98
Spg7Q3ULF4 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC27.39■■□□□ 1.98
Spg7Q3ULF4 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
Spg7Q3ULF4 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC27.39■■□□□ 1.98
Spg7Q3ULF4 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC27.39■■□□□ 1.98
Spg7Q3ULF4 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
Spg7Q3ULF4 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC27.39■■□□□ 1.98
Spg7Q3ULF4 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
Spg7Q3ULF4 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
Spg7Q3ULF4 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC27.38■■□□□ 1.97
Spg7Q3ULF4 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC27.38■■□□□ 1.97
Spg7Q3ULF4 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
Spg7Q3ULF4 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
Spg7Q3ULF4 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC27.38■■□□□ 1.97
Spg7Q3ULF4 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC27.36■■□□□ 1.97
Spg7Q3ULF4 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC27.35■■□□□ 1.97
Spg7Q3ULF4 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC27.34■■□□□ 1.97
Spg7Q3ULF4 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
Spg7Q3ULF4 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC27.34■■□□□ 1.97
Spg7Q3ULF4 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC27.34■■□□□ 1.97
Spg7Q3ULF4 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC27.33■■□□□ 1.97
Spg7Q3ULF4 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC27.32■■□□□ 1.96
Spg7Q3ULF4 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
Spg7Q3ULF4 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC27.31■■□□□ 1.96
Spg7Q3ULF4 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
Spg7Q3ULF4 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
Spg7Q3ULF4 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC27.31■■□□□ 1.96
Spg7Q3ULF4 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC27.31■■□□□ 1.96
Spg7Q3ULF4 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
Spg7Q3ULF4 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC27.3■■□□□ 1.96
Spg7Q3ULF4 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
Spg7Q3ULF4 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC27.29■■□□□ 1.96
Spg7Q3ULF4 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
Spg7Q3ULF4 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
Spg7Q3ULF4 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC27.28■■□□□ 1.96
Spg7Q3ULF4 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
Spg7Q3ULF4 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC27.27■■□□□ 1.96
Spg7Q3ULF4 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC27.27■■□□□ 1.96
Spg7Q3ULF4 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC27.27■■□□□ 1.96
Spg7Q3ULF4 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
Spg7Q3ULF4 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC27.27■■□□□ 1.96
Spg7Q3ULF4 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC27.27■■□□□ 1.96
Spg7Q3ULF4 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.96
Spg7Q3ULF4 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
Spg7Q3ULF4 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC27.24■■□□□ 1.95
Spg7Q3ULF4 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
Spg7Q3ULF4 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
Spg7Q3ULF4 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC27.23■■□□□ 1.95
Spg7Q3ULF4 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC27.23■■□□□ 1.95
Spg7Q3ULF4 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC27.22■■□□□ 1.95
Spg7Q3ULF4 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC27.22■■□□□ 1.95
Spg7Q3ULF4 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
Spg7Q3ULF4 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC27.21■■□□□ 1.95
Spg7Q3ULF4 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC27.21■■□□□ 1.95
Spg7Q3ULF4 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC27.21■■□□□ 1.95
Spg7Q3ULF4 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
Spg7Q3ULF4 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC27.21■■□□□ 1.95
Spg7Q3ULF4 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
Spg7Q3ULF4 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
Spg7Q3ULF4 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
Spg7Q3ULF4 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC27.2■■□□□ 1.95
Spg7Q3ULF4 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
Spg7Q3ULF4 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC27.19■■□□□ 1.94
Spg7Q3ULF4 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
Spg7Q3ULF4 Gm5921-201ENSMUST00000075898 882 ntBASIC27.19■■□□□ 1.94
Spg7Q3ULF4 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC27.19■■□□□ 1.94
Spg7Q3ULF4 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
Spg7Q3ULF4 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
Spg7Q3ULF4 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC27.17■■□□□ 1.94
Spg7Q3ULF4 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC27.17■■□□□ 1.94
Spg7Q3ULF4 AC117769.4-201ENSMUST00000225679 685 ntBASIC27.17■■□□□ 1.94
Spg7Q3ULF4 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
Spg7Q3ULF4 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC27.17■■□□□ 1.94
Spg7Q3ULF4 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
Spg7Q3ULF4 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
Spg7Q3ULF4 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
Spg7Q3ULF4 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
Spg7Q3ULF4 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
Spg7Q3ULF4 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms