Protein–RNA interactions for Protein: Q3U1D9

UPF0602 protein C4orf47 homolog, mousemouse

Predictions only

Length 316 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3U1D9 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Q3U1D9 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC19.82■□□□□ 0.76
Q3U1D9 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Q3U1D9 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Q3U1D9 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Q3U1D9 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC19.81■□□□□ 0.76
Q3U1D9 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC19.81■□□□□ 0.76
Q3U1D9 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC19.81■□□□□ 0.76
Q3U1D9 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Q3U1D9 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Q3U1D9 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Q3U1D9 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Q3U1D9 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Q3U1D9 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Q3U1D9 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Q3U1D9 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Q3U1D9 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Q3U1D9 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC19.79■□□□□ 0.76
Q3U1D9 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Q3U1D9 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Q3U1D9 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Q3U1D9 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Q3U1D9 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Q3U1D9 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Q3U1D9 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Q3U1D9 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC19.77■□□□□ 0.76
Q3U1D9 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Q3U1D9 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Q3U1D9 Gm44428-201ENSMUST00000204474 874 ntBASIC19.76■□□□□ 0.75
Q3U1D9 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Q3U1D9 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Q3U1D9 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC19.75■□□□□ 0.75
Q3U1D9 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Q3U1D9 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC19.74■□□□□ 0.75
Q3U1D9 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Q3U1D9 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Q3U1D9 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
Q3U1D9 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Q3U1D9 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Q3U1D9 AC151971.4-201ENSMUST00000214717 704 ntBASIC19.73■□□□□ 0.75
Q3U1D9 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Q3U1D9 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Q3U1D9 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Q3U1D9 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Q3U1D9 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC19.72■□□□□ 0.75
Q3U1D9 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Q3U1D9 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC19.72■□□□□ 0.75
Q3U1D9 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Q3U1D9 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Q3U1D9 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Q3U1D9 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC19.71■□□□□ 0.75
Q3U1D9 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Q3U1D9 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Q3U1D9 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Q3U1D9 Gm5067-201ENSMUST00000170449 1009 ntBASIC19.7■□□□□ 0.74
Q3U1D9 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Q3U1D9 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Q3U1D9 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Q3U1D9 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Q3U1D9 Gm10420-201ENSMUST00000121713 882 ntBASIC19.69■□□□□ 0.74
Q3U1D9 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC19.69■□□□□ 0.74
Q3U1D9 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Q3U1D9 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC19.69■□□□□ 0.74
Q3U1D9 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Q3U1D9 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Q3U1D9 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Q3U1D9 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Q3U1D9 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC19.67■□□□□ 0.74
Q3U1D9 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC19.67■□□□□ 0.74
Q3U1D9 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Q3U1D9 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Q3U1D9 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Q3U1D9 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC19.66■□□□□ 0.74
Q3U1D9 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Q3U1D9 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Q3U1D9 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Q3U1D9 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Q3U1D9 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Q3U1D9 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Q3U1D9 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Q3U1D9 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC19.65■□□□□ 0.74
Q3U1D9 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Q3U1D9 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Q3U1D9 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC19.64■□□□□ 0.73
Q3U1D9 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Q3U1D9 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Q3U1D9 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC19.63■□□□□ 0.73
Q3U1D9 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Q3U1D9 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Q3U1D9 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Q3U1D9 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Q3U1D9 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Q3U1D9 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
Q3U1D9 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Q3U1D9 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Q3U1D9 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Q3U1D9 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Q3U1D9 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC19.6■□□□□ 0.73
Q3U1D9 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Q3U1D9 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms