Protein–RNA interactions for Protein: Q3U1D9

UPF0602 protein C4orf47 homolog, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3U1D9 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Q3U1D9 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC19.82■□□□□ 0.76
Q3U1D9 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Q3U1D9 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Q3U1D9 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Q3U1D9 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC19.81■□□□□ 0.76
Q3U1D9 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC19.81■□□□□ 0.76
Q3U1D9 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC19.81■□□□□ 0.76
Q3U1D9 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Q3U1D9 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Q3U1D9 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Q3U1D9 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Q3U1D9 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Q3U1D9 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Q3U1D9 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Q3U1D9 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Q3U1D9 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Q3U1D9 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC19.79■□□□□ 0.76
Q3U1D9 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Q3U1D9 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Q3U1D9 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Q3U1D9 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Q3U1D9 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Q3U1D9 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Q3U1D9 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Q3U1D9 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC19.77■□□□□ 0.76
Q3U1D9 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Q3U1D9 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Q3U1D9 Gm44428-201ENSMUST00000204474 874 ntBASIC19.76■□□□□ 0.75
Q3U1D9 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Q3U1D9 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Q3U1D9 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC19.75■□□□□ 0.75
Q3U1D9 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Q3U1D9 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC19.74■□□□□ 0.75
Q3U1D9 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Q3U1D9 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Q3U1D9 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
Q3U1D9 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Q3U1D9 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Q3U1D9 AC151971.4-201ENSMUST00000214717 704 ntBASIC19.73■□□□□ 0.75
Q3U1D9 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Q3U1D9 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Q3U1D9 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Q3U1D9 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Q3U1D9 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC19.72■□□□□ 0.75
Q3U1D9 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Q3U1D9 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC19.72■□□□□ 0.75
Q3U1D9 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Q3U1D9 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Q3U1D9 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Q3U1D9 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC19.71■□□□□ 0.75
Q3U1D9 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Q3U1D9 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Q3U1D9 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Q3U1D9 Gm5067-201ENSMUST00000170449 1009 ntBASIC19.7■□□□□ 0.74
Q3U1D9 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Q3U1D9 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Q3U1D9 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Q3U1D9 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Q3U1D9 Gm10420-201ENSMUST00000121713 882 ntBASIC19.69■□□□□ 0.74
Q3U1D9 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC19.69■□□□□ 0.74
Q3U1D9 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Q3U1D9 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC19.69■□□□□ 0.74
Q3U1D9 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Q3U1D9 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Q3U1D9 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Q3U1D9 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Q3U1D9 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC19.67■□□□□ 0.74
Q3U1D9 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC19.67■□□□□ 0.74
Q3U1D9 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Q3U1D9 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Q3U1D9 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Q3U1D9 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC19.66■□□□□ 0.74
Q3U1D9 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Q3U1D9 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Q3U1D9 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Q3U1D9 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Q3U1D9 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Q3U1D9 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Q3U1D9 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Q3U1D9 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC19.65■□□□□ 0.74
Q3U1D9 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Q3U1D9 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Q3U1D9 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC19.64■□□□□ 0.73
Q3U1D9 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Q3U1D9 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Q3U1D9 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC19.63■□□□□ 0.73
Q3U1D9 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Q3U1D9 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Q3U1D9 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Q3U1D9 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Q3U1D9 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Q3U1D9 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
Q3U1D9 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Q3U1D9 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Q3U1D9 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Q3U1D9 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Q3U1D9 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC19.6■□□□□ 0.73
Q3U1D9 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Q3U1D9 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 96.7 ms