Protein–RNA interactions for Protein: P63006

Lhx1, LIM/homeobox protein Lhx1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx1P63006 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Lhx1P63006 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Lhx1P63006 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC22.45■■□□□ 1.18
Lhx1P63006 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Lhx1P63006 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Lhx1P63006 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Lhx1P63006 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC22.44■■□□□ 1.18
Lhx1P63006 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC22.44■■□□□ 1.18
Lhx1P63006 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Lhx1P63006 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Lhx1P63006 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
Lhx1P63006 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Lhx1P63006 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Lhx1P63006 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Lhx1P63006 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Lhx1P63006 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Lhx1P63006 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC22.42■■□□□ 1.18
Lhx1P63006 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Lhx1P63006 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC22.42■■□□□ 1.18
Lhx1P63006 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC22.41■■□□□ 1.18
Lhx1P63006 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Lhx1P63006 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Lhx1P63006 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Lhx1P63006 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Lhx1P63006 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC22.4■■□□□ 1.18
Lhx1P63006 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC22.4■■□□□ 1.18
Lhx1P63006 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Lhx1P63006 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Lhx1P63006 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Lhx1P63006 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
Lhx1P63006 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
Lhx1P63006 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC22.39■■□□□ 1.18
Lhx1P63006 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC22.39■■□□□ 1.17
Lhx1P63006 Gm12366-201ENSMUST00000121722 873 ntBASIC22.39■■□□□ 1.17
Lhx1P63006 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC22.39■■□□□ 1.17
Lhx1P63006 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC22.39■■□□□ 1.17
Lhx1P63006 Gm5786-201ENSMUST00000085368 882 ntBASIC22.39■■□□□ 1.17
Lhx1P63006 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Lhx1P63006 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Lhx1P63006 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Lhx1P63006 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Lhx1P63006 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Lhx1P63006 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC22.37■■□□□ 1.17
Lhx1P63006 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Lhx1P63006 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Lhx1P63006 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Lhx1P63006 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Lhx1P63006 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC22.36■■□□□ 1.17
Lhx1P63006 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Lhx1P63006 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC22.36■■□□□ 1.17
Lhx1P63006 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Lhx1P63006 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Lhx1P63006 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC22.35■■□□□ 1.17
Lhx1P63006 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Lhx1P63006 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Lhx1P63006 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC22.35■■□□□ 1.17
Lhx1P63006 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Lhx1P63006 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Lhx1P63006 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Lhx1P63006 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Lhx1P63006 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Lhx1P63006 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Lhx1P63006 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC22.33■■□□□ 1.17
Lhx1P63006 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Lhx1P63006 Gm27502-201ENSMUST00000183495 199 ntBASIC22.33■■□□□ 1.17
Lhx1P63006 Gm44428-201ENSMUST00000204474 874 ntBASIC22.33■■□□□ 1.17
Lhx1P63006 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
Lhx1P63006 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC22.33■■□□□ 1.16
Lhx1P63006 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Lhx1P63006 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC22.32■■□□□ 1.16
Lhx1P63006 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC22.32■■□□□ 1.16
Lhx1P63006 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC22.32■■□□□ 1.16
Lhx1P63006 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Lhx1P63006 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Lhx1P63006 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC22.31■■□□□ 1.16
Lhx1P63006 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC22.31■■□□□ 1.16
Lhx1P63006 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC22.31■■□□□ 1.16
Lhx1P63006 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC22.31■■□□□ 1.16
Lhx1P63006 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Lhx1P63006 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Lhx1P63006 Gm14523-201ENSMUST00000117260 558 ntBASIC22.31■■□□□ 1.16
Lhx1P63006 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
Lhx1P63006 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC22.31■■□□□ 1.16
Lhx1P63006 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Lhx1P63006 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
Lhx1P63006 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
Lhx1P63006 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC22.29■■□□□ 1.16
Lhx1P63006 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
Lhx1P63006 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
Lhx1P63006 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Lhx1P63006 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC22.28■■□□□ 1.16
Lhx1P63006 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC22.27■■□□□ 1.16
Lhx1P63006 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC22.27■■□□□ 1.16
Lhx1P63006 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.16
Lhx1P63006 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.15
Lhx1P63006 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Lhx1P63006 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Lhx1P63006 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC22.26■■□□□ 1.15
Lhx1P63006 Gm7332-201ENSMUST00000118351 454 ntBASIC22.26■■□□□ 1.15
Lhx1P63006 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC22.26■■□□□ 1.15
Retrieved 100 of 76,532 protein–RNA pairs in 9.3 ms