Protein–RNA interactions for Protein: P49962

Srp9, Signal recognition particle 9 kDa protein, mousemouse

Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp9P49962 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Srp9P49962 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Srp9P49962 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Srp9P49962 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Srp9P49962 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Srp9P49962 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Srp9P49962 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Srp9P49962 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Srp9P49962 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Srp9P49962 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Srp9P49962 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Srp9P49962 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Srp9P49962 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Srp9P49962 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC19.15■□□□□ 0.66
Srp9P49962 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC19.15■□□□□ 0.66
Srp9P49962 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Srp9P49962 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Srp9P49962 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Srp9P49962 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Srp9P49962 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Srp9P49962 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Srp9P49962 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
Srp9P49962 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Srp9P49962 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Srp9P49962 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC19.12■□□□□ 0.65
Srp9P49962 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Srp9P49962 Gm9939-201ENSMUST00000067161 1154 ntBASIC19.12■□□□□ 0.65
Srp9P49962 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Srp9P49962 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Srp9P49962 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Srp9P49962 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Srp9P49962 Gm42809-201ENSMUST00000198429 1138 ntBASIC19.11■□□□□ 0.65
Srp9P49962 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Srp9P49962 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Srp9P49962 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Srp9P49962 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Srp9P49962 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Srp9P49962 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Srp9P49962 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC19.1■□□□□ 0.65
Srp9P49962 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Srp9P49962 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Srp9P49962 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Srp9P49962 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Srp9P49962 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Srp9P49962 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Srp9P49962 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC19.09■□□□□ 0.65
Srp9P49962 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Srp9P49962 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC19.09■□□□□ 0.65
Srp9P49962 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC19.09■□□□□ 0.65
Srp9P49962 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Srp9P49962 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC19.08■□□□□ 0.65
Srp9P49962 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Srp9P49962 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC19.08■□□□□ 0.65
Srp9P49962 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Srp9P49962 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Srp9P49962 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Srp9P49962 Gm6821-201ENSMUST00000107540 542 ntBASIC19.07■□□□□ 0.64
Srp9P49962 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Srp9P49962 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Srp9P49962 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Srp9P49962 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC19.06■□□□□ 0.64
Srp9P49962 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC19.06■□□□□ 0.64
Srp9P49962 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Srp9P49962 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Srp9P49962 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Srp9P49962 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
Srp9P49962 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Srp9P49962 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Srp9P49962 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
Srp9P49962 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Srp9P49962 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Srp9P49962 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Srp9P49962 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Srp9P49962 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC19.05■□□□□ 0.64
Srp9P49962 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Srp9P49962 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Srp9P49962 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Srp9P49962 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Srp9P49962 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Srp9P49962 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Srp9P49962 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Srp9P49962 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Srp9P49962 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Srp9P49962 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Srp9P49962 Gm20634-201ENSMUST00000090779 2956 ntBASIC19.03■□□□□ 0.64
Srp9P49962 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Srp9P49962 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Srp9P49962 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Srp9P49962 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Srp9P49962 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC19.02■□□□□ 0.64
Srp9P49962 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Srp9P49962 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Srp9P49962 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Srp9P49962 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Srp9P49962 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC19.01■□□□□ 0.63
Srp9P49962 Gm37847-201ENSMUST00000192163 1497 ntBASIC19.01■□□□□ 0.63
Srp9P49962 Gm31748-201ENSMUST00000194938 1497 ntBASIC19.01■□□□□ 0.63
Srp9P49962 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Srp9P49962 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Srp9P49962 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC19■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 13.1 ms