Protein–RNA interactions for Protein: P48298

Ccl11, Eotaxin, mousemouse

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl11P48298 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC19.33■□□□□ 0.68
Ccl11P48298 Gm14523-201ENSMUST00000117260 558 ntBASIC19.32■□□□□ 0.68
Ccl11P48298 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ccl11P48298 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Ccl11P48298 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Ccl11P48298 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
Ccl11P48298 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC19.31■□□□□ 0.68
Ccl11P48298 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Ccl11P48298 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Ccl11P48298 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ccl11P48298 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Ccl11P48298 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC19.3■□□□□ 0.68
Ccl11P48298 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Ccl11P48298 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC19.3■□□□□ 0.68
Ccl11P48298 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC19.3■□□□□ 0.68
Ccl11P48298 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ccl11P48298 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ccl11P48298 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC19.29■□□□□ 0.68
Ccl11P48298 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ccl11P48298 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
Ccl11P48298 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Ccl11P48298 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ccl11P48298 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Ccl11P48298 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC19.28■□□□□ 0.68
Ccl11P48298 AC151971.4-201ENSMUST00000214717 704 ntBASIC19.28■□□□□ 0.68
Ccl11P48298 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ccl11P48298 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Ccl11P48298 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ccl11P48298 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
Ccl11P48298 AC122428.3-201ENSMUST00000215551 2290 ntBASIC19.27■□□□□ 0.68
Ccl11P48298 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC19.27■□□□□ 0.68
Ccl11P48298 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC19.27■□□□□ 0.67
Ccl11P48298 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ccl11P48298 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ccl11P48298 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ccl11P48298 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Ccl11P48298 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ccl11P48298 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Ccl11P48298 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ccl11P48298 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ccl11P48298 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ccl11P48298 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC19.24■□□□□ 0.67
Ccl11P48298 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Ccl11P48298 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ccl11P48298 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ccl11P48298 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC19.23■□□□□ 0.67
Ccl11P48298 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ccl11P48298 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ccl11P48298 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Ccl11P48298 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ccl11P48298 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC19.22■□□□□ 0.67
Ccl11P48298 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC19.22■□□□□ 0.67
Ccl11P48298 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC19.22■□□□□ 0.67
Ccl11P48298 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ccl11P48298 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ccl11P48298 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ccl11P48298 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Ccl11P48298 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ccl11P48298 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ccl11P48298 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ccl11P48298 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Ccl11P48298 Gm44428-201ENSMUST00000204474 874 ntBASIC19.2■□□□□ 0.66
Ccl11P48298 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ccl11P48298 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ccl11P48298 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Ccl11P48298 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ccl11P48298 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ccl11P48298 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC19.2■□□□□ 0.66
Ccl11P48298 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ccl11P48298 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ccl11P48298 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Ccl11P48298 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ccl11P48298 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ccl11P48298 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Ccl11P48298 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Ccl11P48298 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC19.17■□□□□ 0.66
Ccl11P48298 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Ccl11P48298 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Ccl11P48298 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC19.17■□□□□ 0.66
Ccl11P48298 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Ccl11P48298 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ccl11P48298 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Ccl11P48298 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ccl11P48298 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Ccl11P48298 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Ccl11P48298 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Ccl11P48298 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ccl11P48298 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Ccl11P48298 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Ccl11P48298 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ccl11P48298 Gm5067-201ENSMUST00000170449 1009 ntBASIC19.15■□□□□ 0.66
Ccl11P48298 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Ccl11P48298 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Ccl11P48298 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ccl11P48298 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC19.14■□□□□ 0.65
Ccl11P48298 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ccl11P48298 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ccl11P48298 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ccl11P48298 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Ccl11P48298 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 77.5 ms