Protein–RNA interactions for Protein: P35582

Foxa1, Hepatocyte nuclear factor 3-alpha, mousemouse

Predictions only

Length 468 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxa1P35582 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
Foxa1P35582 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC21.05■□□□□ 0.96
Foxa1P35582 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Foxa1P35582 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Foxa1P35582 AC122317.2-201ENSMUST00000218708 1248 ntBASIC21.04■□□□□ 0.96
Foxa1P35582 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Foxa1P35582 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Foxa1P35582 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Foxa1P35582 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Foxa1P35582 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
Foxa1P35582 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Foxa1P35582 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Foxa1P35582 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Foxa1P35582 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Foxa1P35582 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
Foxa1P35582 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Foxa1P35582 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Foxa1P35582 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Foxa1P35582 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Foxa1P35582 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Foxa1P35582 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC21■□□□□ 0.95
Foxa1P35582 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC21■□□□□ 0.95
Foxa1P35582 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC21■□□□□ 0.95
Foxa1P35582 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC21■□□□□ 0.95
Foxa1P35582 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Foxa1P35582 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Foxa1P35582 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Foxa1P35582 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Foxa1P35582 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
Foxa1P35582 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Foxa1P35582 AC153911.1-201ENSMUST00000220378 758 ntBASIC20.97■□□□□ 0.95
Foxa1P35582 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Foxa1P35582 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Foxa1P35582 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Foxa1P35582 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Foxa1P35582 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Foxa1P35582 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Foxa1P35582 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Foxa1P35582 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC20.95■□□□□ 0.95
Foxa1P35582 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC20.95■□□□□ 0.94
Foxa1P35582 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Foxa1P35582 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Foxa1P35582 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Foxa1P35582 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Foxa1P35582 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Foxa1P35582 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Foxa1P35582 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Foxa1P35582 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Foxa1P35582 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Foxa1P35582 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
Foxa1P35582 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Foxa1P35582 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Foxa1P35582 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Foxa1P35582 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC20.92■□□□□ 0.94
Foxa1P35582 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Foxa1P35582 Terc-201ENSMUST00000082862 423 ntBASIC20.92■□□□□ 0.94
Foxa1P35582 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC20.92■□□□□ 0.94
Foxa1P35582 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Foxa1P35582 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC20.91■□□□□ 0.94
Foxa1P35582 Scarna2-201ENSMUST00000157560 414 ntBASIC20.91■□□□□ 0.94
Foxa1P35582 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC20.91■□□□□ 0.94
Foxa1P35582 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Foxa1P35582 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Foxa1P35582 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Foxa1P35582 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Foxa1P35582 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Foxa1P35582 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Foxa1P35582 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Foxa1P35582 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Foxa1P35582 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC20.88■□□□□ 0.93
Foxa1P35582 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Foxa1P35582 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Foxa1P35582 Gm9910-201ENSMUST00000195385 1550 ntBASIC20.88■□□□□ 0.93
Foxa1P35582 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC20.87■□□□□ 0.93
Foxa1P35582 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Foxa1P35582 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Foxa1P35582 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Foxa1P35582 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Foxa1P35582 Gm9806-201ENSMUST00000051080 552 ntBASIC20.86■□□□□ 0.93
Foxa1P35582 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Foxa1P35582 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Foxa1P35582 Gm42699-201ENSMUST00000198104 1657 ntBASIC20.86■□□□□ 0.93
Foxa1P35582 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Foxa1P35582 Gm16437-201ENSMUST00000025669 507 ntBASIC20.85■□□□□ 0.93
Foxa1P35582 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Foxa1P35582 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Foxa1P35582 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Foxa1P35582 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Foxa1P35582 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Foxa1P35582 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Foxa1P35582 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Foxa1P35582 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Foxa1P35582 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Foxa1P35582 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Foxa1P35582 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Foxa1P35582 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC20.83■□□□□ 0.92
Foxa1P35582 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC20.83■□□□□ 0.92
Foxa1P35582 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Foxa1P35582 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Foxa1P35582 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 58.4 ms