Protein–RNA interactions for Protein: P25118

Tnfrsf1a, Tumor necrosis factor receptor superfamily member 1A, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1aP25118 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Tnfrsf1aP25118 Gm4419-202ENSMUST00000226239 1431 ntBASIC18.92■□□□□ 0.62
Tnfrsf1aP25118 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Tnfrsf1aP25118 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Tnfrsf1aP25118 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
Tnfrsf1aP25118 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Tnfrsf1aP25118 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Tnfrsf1aP25118 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Tnfrsf1aP25118 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC18.91■□□□□ 0.62
Tnfrsf1aP25118 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Tnfrsf1aP25118 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Tnfrsf1aP25118 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Tnfrsf1aP25118 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Tnfrsf1aP25118 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Tnfrsf1aP25118 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Tnfrsf1aP25118 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Tnfrsf1aP25118 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Tnfrsf1aP25118 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Tnfrsf1aP25118 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Tnfrsf1aP25118 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Tnfrsf1aP25118 AC131739.1-201ENSMUST00000221692 1245 ntBASIC18.89■□□□□ 0.61
Tnfrsf1aP25118 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Tnfrsf1aP25118 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Tnfrsf1aP25118 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Tnfrsf1aP25118 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Tnfrsf1aP25118 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Tnfrsf1aP25118 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Tnfrsf1aP25118 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Tnfrsf1aP25118 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Tnfrsf1aP25118 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Tnfrsf1aP25118 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC18.87■□□□□ 0.61
Tnfrsf1aP25118 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC18.87■□□□□ 0.61
Tnfrsf1aP25118 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC18.87■□□□□ 0.61
Tnfrsf1aP25118 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Tnfrsf1aP25118 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Tnfrsf1aP25118 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Tnfrsf1aP25118 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Tnfrsf1aP25118 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Tnfrsf1aP25118 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Tnfrsf1aP25118 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Tnfrsf1aP25118 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Tnfrsf1aP25118 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Tnfrsf1aP25118 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Tnfrsf1aP25118 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC18.86■□□□□ 0.61
Tnfrsf1aP25118 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Tnfrsf1aP25118 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Tnfrsf1aP25118 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Tnfrsf1aP25118 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC18.86■□□□□ 0.61
Tnfrsf1aP25118 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Tnfrsf1aP25118 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Tnfrsf1aP25118 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Tnfrsf1aP25118 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC18.85■□□□□ 0.61
Tnfrsf1aP25118 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Tnfrsf1aP25118 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Tnfrsf1aP25118 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Tnfrsf1aP25118 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Tnfrsf1aP25118 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Tnfrsf1aP25118 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC18.84■□□□□ 0.61
Tnfrsf1aP25118 Il17rd-202ENSMUST00000223942 2186 ntBASIC18.84■□□□□ 0.61
Tnfrsf1aP25118 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC18.84■□□□□ 0.61
Tnfrsf1aP25118 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
Tnfrsf1aP25118 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Tnfrsf1aP25118 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC18.83■□□□□ 0.61
Tnfrsf1aP25118 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Tnfrsf1aP25118 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tnfrsf1aP25118 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tnfrsf1aP25118 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Tnfrsf1aP25118 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Tnfrsf1aP25118 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tnfrsf1aP25118 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tnfrsf1aP25118 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Tnfrsf1aP25118 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tnfrsf1aP25118 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tnfrsf1aP25118 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Tnfrsf1aP25118 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Tnfrsf1aP25118 Gm42699-201ENSMUST00000198104 1657 ntBASIC18.8■□□□□ 0.6
Tnfrsf1aP25118 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tnfrsf1aP25118 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Tnfrsf1aP25118 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tnfrsf1aP25118 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tnfrsf1aP25118 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC18.79■□□□□ 0.6
Tnfrsf1aP25118 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tnfrsf1aP25118 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Tnfrsf1aP25118 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Tnfrsf1aP25118 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Tnfrsf1aP25118 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tnfrsf1aP25118 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Tnfrsf1aP25118 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tnfrsf1aP25118 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tnfrsf1aP25118 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tnfrsf1aP25118 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tnfrsf1aP25118 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Tnfrsf1aP25118 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Tnfrsf1aP25118 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Tnfrsf1aP25118 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Tnfrsf1aP25118 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tnfrsf1aP25118 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tnfrsf1aP25118 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC18.76■□□□□ 0.59
Tnfrsf1aP25118 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tnfrsf1aP25118 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 81.1 ms