Protein–RNA interactions for Protein: P11276

Fn1, Fibronectin, mousemouse

Known RBP Predictions only

Length 2,477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fn1P11276 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Fn1P11276 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Fn1P11276 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Fn1P11276 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Fn1P11276 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
Fn1P11276 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Fn1P11276 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC18.27■□□□□ 0.51
Fn1P11276 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Fn1P11276 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Fn1P11276 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC18.26■□□□□ 0.51
Fn1P11276 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Fn1P11276 Gm13241-201ENSMUST00000094493 780 ntBASIC18.26■□□□□ 0.51
Fn1P11276 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Fn1P11276 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Fn1P11276 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC18.24■□□□□ 0.51
Fn1P11276 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Fn1P11276 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC18.24■□□□□ 0.51
Fn1P11276 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Fn1P11276 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Fn1P11276 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Fn1P11276 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Fn1P11276 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Fn1P11276 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Fn1P11276 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC18.24■□□□□ 0.51
Fn1P11276 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Fn1P11276 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC18.23■□□□□ 0.51
Fn1P11276 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Fn1P11276 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Fn1P11276 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC18.23■□□□□ 0.51
Fn1P11276 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC18.22■□□□□ 0.51
Fn1P11276 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Fn1P11276 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC18.21■□□□□ 0.51
Fn1P11276 Etf1-202ENSMUST00000180351 108 ntBASIC18.21■□□□□ 0.5
Fn1P11276 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Fn1P11276 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Fn1P11276 Terc-201ENSMUST00000082862 423 ntBASIC18.2■□□□□ 0.5
Fn1P11276 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Fn1P11276 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Fn1P11276 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC18.2■□□□□ 0.5
Fn1P11276 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Fn1P11276 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Fn1P11276 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC18.19■□□□□ 0.5
Fn1P11276 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC18.19■□□□□ 0.5
Fn1P11276 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Fn1P11276 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Fn1P11276 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Fn1P11276 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Fn1P11276 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Fn1P11276 Gm43034-201ENSMUST00000198678 1364 ntBASIC18.18■□□□□ 0.5
Fn1P11276 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC18.17■□□□□ 0.5
Fn1P11276 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Fn1P11276 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Fn1P11276 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC18.16■□□□□ 0.5
Fn1P11276 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Fn1P11276 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Fn1P11276 Gm10232-201ENSMUST00000089221 720 ntBASIC18.16■□□□□ 0.5
Fn1P11276 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Fn1P11276 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Fn1P11276 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Fn1P11276 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Fn1P11276 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Fn1P11276 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC18.15■□□□□ 0.5
Fn1P11276 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC18.15■□□□□ 0.5
Fn1P11276 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC18.14■□□□□ 0.5
Fn1P11276 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Fn1P11276 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Fn1P11276 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Fn1P11276 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Fn1P11276 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Fn1P11276 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Fn1P11276 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Fn1P11276 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC18.13■□□□□ 0.49
Fn1P11276 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Fn1P11276 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Fn1P11276 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Fn1P11276 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Fn1P11276 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
Fn1P11276 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Fn1P11276 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Fn1P11276 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Fn1P11276 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Fn1P11276 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Fn1P11276 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Fn1P11276 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC18.11■□□□□ 0.49
Fn1P11276 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Fn1P11276 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC18.11■□□□□ 0.49
Fn1P11276 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Fn1P11276 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Fn1P11276 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC18.1■□□□□ 0.49
Fn1P11276 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC18.1■□□□□ 0.49
Fn1P11276 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC18.1■□□□□ 0.49
Fn1P11276 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Fn1P11276 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Fn1P11276 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Fn1P11276 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Fn1P11276 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Fn1P11276 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Fn1P11276 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC18.09■□□□□ 0.49
Fn1P11276 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Fn1P11276 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms