Protein–RNA interactions for Protein: P04925

Prnp, Major prion protein, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrnpP04925 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC24.05■■□□□ 1.44
PrnpP04925 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
PrnpP04925 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
PrnpP04925 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
PrnpP04925 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC24.04■■□□□ 1.44
PrnpP04925 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
PrnpP04925 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC24.03■■□□□ 1.44
PrnpP04925 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
PrnpP04925 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
PrnpP04925 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
PrnpP04925 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
PrnpP04925 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC24.02■■□□□ 1.44
PrnpP04925 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
PrnpP04925 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC24.02■■□□□ 1.44
PrnpP04925 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC24.01■■□□□ 1.43
PrnpP04925 Gm4419-202ENSMUST00000226239 1431 ntBASIC24.01■■□□□ 1.43
PrnpP04925 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
PrnpP04925 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC24■■□□□ 1.43
PrnpP04925 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
PrnpP04925 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC23.99■■□□□ 1.43
PrnpP04925 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC23.99■■□□□ 1.43
PrnpP04925 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
PrnpP04925 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
PrnpP04925 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
PrnpP04925 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC23.97■■□□□ 1.43
PrnpP04925 Amer2-203ENSMUST00000225247 2662 ntBASIC23.97■■□□□ 1.43
PrnpP04925 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
PrnpP04925 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
PrnpP04925 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
PrnpP04925 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
PrnpP04925 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
PrnpP04925 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC23.95■■□□□ 1.42
PrnpP04925 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC23.94■■□□□ 1.42
PrnpP04925 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC23.94■■□□□ 1.42
PrnpP04925 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
PrnpP04925 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC23.93■■□□□ 1.42
PrnpP04925 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC23.92■■□□□ 1.42
PrnpP04925 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
PrnpP04925 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
PrnpP04925 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
PrnpP04925 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC23.91■■□□□ 1.42
PrnpP04925 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
PrnpP04925 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
PrnpP04925 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC23.89■■□□□ 1.41
PrnpP04925 Gm15546-201ENSMUST00000122095 826 ntBASIC23.89■■□□□ 1.41
PrnpP04925 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
PrnpP04925 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
PrnpP04925 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC23.88■■□□□ 1.41
PrnpP04925 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
PrnpP04925 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
PrnpP04925 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
PrnpP04925 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
PrnpP04925 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
PrnpP04925 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
PrnpP04925 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
PrnpP04925 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
PrnpP04925 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC23.87■■□□□ 1.41
PrnpP04925 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC23.86■■□□□ 1.41
PrnpP04925 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC23.86■■□□□ 1.41
PrnpP04925 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC23.86■■□□□ 1.41
PrnpP04925 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC23.86■■□□□ 1.41
PrnpP04925 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
PrnpP04925 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC23.84■■□□□ 1.41
PrnpP04925 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC23.84■■□□□ 1.41
PrnpP04925 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC23.84■■□□□ 1.41
PrnpP04925 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC23.84■■□□□ 1.41
PrnpP04925 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC23.82■■□□□ 1.4
PrnpP04925 Gm43592-201ENSMUST00000196922 1165 ntBASIC23.82■■□□□ 1.4
PrnpP04925 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC23.82■■□□□ 1.4
PrnpP04925 AC117769.4-201ENSMUST00000225679 685 ntBASIC23.82■■□□□ 1.4
PrnpP04925 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
PrnpP04925 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
PrnpP04925 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC23.81■■□□□ 1.4
PrnpP04925 Gm22567-201ENSMUST00000175542 342 ntBASIC23.81■■□□□ 1.4
PrnpP04925 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
PrnpP04925 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC23.81■■□□□ 1.4
PrnpP04925 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
PrnpP04925 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC23.8■■□□□ 1.4
PrnpP04925 Gm5522-201ENSMUST00000189483 1242 ntBASIC23.8■■□□□ 1.4
PrnpP04925 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC23.8■■□□□ 1.4
PrnpP04925 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC23.8■■□□□ 1.4
PrnpP04925 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
PrnpP04925 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
PrnpP04925 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
PrnpP04925 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC23.79■■□□□ 1.4
PrnpP04925 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
PrnpP04925 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
PrnpP04925 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
PrnpP04925 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
PrnpP04925 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
PrnpP04925 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC23.76■■□□□ 1.39
PrnpP04925 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC23.75■■□□□ 1.39
PrnpP04925 Nsd1-203ENSMUST00000224156 1149 ntBASIC23.75■■□□□ 1.39
PrnpP04925 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC23.74■■□□□ 1.39
PrnpP04925 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC23.74■■□□□ 1.39
PrnpP04925 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC23.74■■□□□ 1.39
PrnpP04925 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC23.73■■□□□ 1.39
PrnpP04925 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC23.73■■□□□ 1.39
PrnpP04925 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC23.73■■□□□ 1.39
PrnpP04925 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Retrieved 100 of 76,532 protein–RNA pairs in 58.6 ms