Protein–RNA interactions for Protein: O88737

Bsn, Protein bassoon, mousemouse

Predictions only

Length 3,942 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BsnO88737 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
BsnO88737 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
BsnO88737 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
BsnO88737 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
BsnO88737 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC18.41■□□□□ 0.54
BsnO88737 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
BsnO88737 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
BsnO88737 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
BsnO88737 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
BsnO88737 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
BsnO88737 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
BsnO88737 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
BsnO88737 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
BsnO88737 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
BsnO88737 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
BsnO88737 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
BsnO88737 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
BsnO88737 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
BsnO88737 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
BsnO88737 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
BsnO88737 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
BsnO88737 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
BsnO88737 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
BsnO88737 Gm45444-201ENSMUST00000211394 898 ntBASIC18.37■□□□□ 0.53
BsnO88737 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
BsnO88737 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
BsnO88737 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC18.37■□□□□ 0.53
BsnO88737 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
BsnO88737 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
BsnO88737 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
BsnO88737 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC18.36■□□□□ 0.53
BsnO88737 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
BsnO88737 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC18.35■□□□□ 0.53
BsnO88737 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
BsnO88737 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
BsnO88737 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC18.35■□□□□ 0.53
BsnO88737 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
BsnO88737 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC18.35■□□□□ 0.53
BsnO88737 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC18.35■□□□□ 0.53
BsnO88737 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
BsnO88737 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
BsnO88737 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
BsnO88737 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC18.34■□□□□ 0.53
BsnO88737 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
BsnO88737 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
BsnO88737 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
BsnO88737 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
BsnO88737 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
BsnO88737 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
BsnO88737 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
BsnO88737 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
BsnO88737 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
BsnO88737 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
BsnO88737 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
BsnO88737 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC18.3■□□□□ 0.52
BsnO88737 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
BsnO88737 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC18.29■□□□□ 0.52
BsnO88737 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
BsnO88737 Gm9959-201ENSMUST00000068277 390 ntBASIC18.29■□□□□ 0.52
BsnO88737 Serp2-204ENSMUST00000228055 705 ntBASIC18.28■□□□□ 0.52
BsnO88737 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
BsnO88737 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
BsnO88737 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC18.28■□□□□ 0.52
BsnO88737 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
BsnO88737 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
BsnO88737 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
BsnO88737 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
BsnO88737 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC18.27■□□□□ 0.51
BsnO88737 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.51
BsnO88737 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
BsnO88737 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC18.26■□□□□ 0.51
BsnO88737 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
BsnO88737 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
BsnO88737 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
BsnO88737 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
BsnO88737 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
BsnO88737 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
BsnO88737 Terc-201ENSMUST00000082862 423 ntBASIC18.25■□□□□ 0.51
BsnO88737 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
BsnO88737 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
BsnO88737 Gm14121-201ENSMUST00000121441 1380 ntBASIC18.24■□□□□ 0.51
BsnO88737 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
BsnO88737 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
BsnO88737 Gm43445-201ENSMUST00000198564 2091 ntBASIC18.23■□□□□ 0.51
BsnO88737 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
BsnO88737 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
BsnO88737 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
BsnO88737 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
BsnO88737 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
BsnO88737 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC18.22■□□□□ 0.51
BsnO88737 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC18.21■□□□□ 0.51
BsnO88737 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
BsnO88737 Nsd1-203ENSMUST00000224156 1149 ntBASIC18.2■□□□□ 0.5
BsnO88737 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
BsnO88737 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
BsnO88737 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC18.2■□□□□ 0.5
BsnO88737 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC18.2■□□□□ 0.5
BsnO88737 Gm43592-201ENSMUST00000196922 1165 ntBASIC18.2■□□□□ 0.5
BsnO88737 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
BsnO88737 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms