Protein–RNA interactions for Protein: O70137

Alx3, Homeobox protein aristaless-like 3, mousemouse

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx3O70137 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Alx3O70137 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC20.55■□□□□ 0.88
Alx3O70137 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Alx3O70137 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Alx3O70137 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Alx3O70137 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Alx3O70137 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Alx3O70137 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Alx3O70137 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Alx3O70137 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Alx3O70137 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Alx3O70137 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Alx3O70137 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Alx3O70137 Gm4419-202ENSMUST00000226239 1431 ntBASIC20.53■□□□□ 0.88
Alx3O70137 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Alx3O70137 Gm37136-201ENSMUST00000194368 194 ntBASIC20.52■□□□□ 0.88
Alx3O70137 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Alx3O70137 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Alx3O70137 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Alx3O70137 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Alx3O70137 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Alx3O70137 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC20.5■□□□□ 0.87
Alx3O70137 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Alx3O70137 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Alx3O70137 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Alx3O70137 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Alx3O70137 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Alx3O70137 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Alx3O70137 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC20.48■□□□□ 0.87
Alx3O70137 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC20.48■□□□□ 0.87
Alx3O70137 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Alx3O70137 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Alx3O70137 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Alx3O70137 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Alx3O70137 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Alx3O70137 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Alx3O70137 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Alx3O70137 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC20.47■□□□□ 0.87
Alx3O70137 Gm9939-201ENSMUST00000067161 1154 ntBASIC20.47■□□□□ 0.87
Alx3O70137 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Alx3O70137 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Alx3O70137 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Alx3O70137 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Alx3O70137 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC20.46■□□□□ 0.87
Alx3O70137 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Alx3O70137 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Alx3O70137 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Alx3O70137 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC20.46■□□□□ 0.87
Alx3O70137 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Alx3O70137 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.87
Alx3O70137 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Alx3O70137 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Alx3O70137 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Alx3O70137 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Alx3O70137 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Alx3O70137 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Alx3O70137 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Alx3O70137 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Alx3O70137 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Alx3O70137 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Alx3O70137 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Alx3O70137 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC20.44■□□□□ 0.86
Alx3O70137 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Alx3O70137 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Alx3O70137 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Alx3O70137 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Alx3O70137 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Alx3O70137 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Alx3O70137 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Alx3O70137 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Alx3O70137 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Alx3O70137 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Alx3O70137 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Alx3O70137 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Alx3O70137 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Alx3O70137 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC20.4■□□□□ 0.86
Alx3O70137 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Alx3O70137 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC20.4■□□□□ 0.86
Alx3O70137 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC20.4■□□□□ 0.86
Alx3O70137 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Alx3O70137 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Alx3O70137 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Alx3O70137 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
Alx3O70137 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Alx3O70137 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC20.38■□□□□ 0.85
Alx3O70137 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Alx3O70137 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Alx3O70137 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Alx3O70137 Gm42699-201ENSMUST00000198104 1657 ntBASIC20.38■□□□□ 0.85
Alx3O70137 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Alx3O70137 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
Alx3O70137 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Alx3O70137 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
Alx3O70137 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Alx3O70137 Gm6821-201ENSMUST00000107540 542 ntBASIC20.37■□□□□ 0.85
Alx3O70137 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Alx3O70137 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC20.37■□□□□ 0.85
Alx3O70137 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC20.36■□□□□ 0.85
Alx3O70137 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Alx3O70137 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms