Protein–RNA interactions for Protein: O55057

Pde6d, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, mousemouse

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6dO55057 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Pde6dO55057 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pde6dO55057 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC17.96■□□□□ 0.47
Pde6dO55057 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Pde6dO55057 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Pde6dO55057 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pde6dO55057 H3f3aos-201ENSMUST00000097448 2905 ntBASIC17.96■□□□□ 0.47
Pde6dO55057 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Pde6dO55057 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pde6dO55057 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Pde6dO55057 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pde6dO55057 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.46
Pde6dO55057 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Pde6dO55057 Gm37847-201ENSMUST00000192163 1497 ntBASIC17.95■□□□□ 0.46
Pde6dO55057 Gm31748-201ENSMUST00000194938 1497 ntBASIC17.95■□□□□ 0.46
Pde6dO55057 Gm13042-201ENSMUST00000119244 1955 ntBASIC17.95■□□□□ 0.46
Pde6dO55057 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Pde6dO55057 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Pde6dO55057 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pde6dO55057 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Pde6dO55057 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pde6dO55057 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pde6dO55057 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pde6dO55057 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pde6dO55057 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Pde6dO55057 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Pde6dO55057 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pde6dO55057 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC17.94■□□□□ 0.46
Pde6dO55057 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Pde6dO55057 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Pde6dO55057 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Pde6dO55057 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pde6dO55057 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pde6dO55057 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC17.92■□□□□ 0.46
Pde6dO55057 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pde6dO55057 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pde6dO55057 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Pde6dO55057 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pde6dO55057 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pde6dO55057 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pde6dO55057 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Pde6dO55057 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Pde6dO55057 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pde6dO55057 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Pde6dO55057 Gm26115-201ENSMUST00000175605 87 ntBASIC17.89■□□□□ 0.45
Pde6dO55057 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC17.89■□□□□ 0.45
Pde6dO55057 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Pde6dO55057 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Pde6dO55057 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC17.89■□□□□ 0.45
Pde6dO55057 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pde6dO55057 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pde6dO55057 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pde6dO55057 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pde6dO55057 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Pde6dO55057 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pde6dO55057 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pde6dO55057 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Pde6dO55057 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Pde6dO55057 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Pde6dO55057 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Pde6dO55057 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pde6dO55057 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pde6dO55057 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Pde6dO55057 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pde6dO55057 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pde6dO55057 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Pde6dO55057 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Pde6dO55057 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pde6dO55057 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Pde6dO55057 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pde6dO55057 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pde6dO55057 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Pde6dO55057 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
Pde6dO55057 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pde6dO55057 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pde6dO55057 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pde6dO55057 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Pde6dO55057 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pde6dO55057 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pde6dO55057 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
Pde6dO55057 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Pde6dO55057 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC17.83■□□□□ 0.45
Pde6dO55057 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Pde6dO55057 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pde6dO55057 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pde6dO55057 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pde6dO55057 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Pde6dO55057 Gm6934-201ENSMUST00000194780 1905 ntBASIC17.82■□□□□ 0.44
Pde6dO55057 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Pde6dO55057 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pde6dO55057 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pde6dO55057 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Pde6dO55057 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pde6dO55057 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pde6dO55057 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pde6dO55057 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pde6dO55057 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pde6dO55057 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Pde6dO55057 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pde6dO55057 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 170.1 ms