Protein–RNA interactions for Protein: O54965

Rnf13, E3 ubiquitin-protein ligase RNF13, mousemouse

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf13O54965 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rnf13O54965 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Rnf13O54965 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rnf13O54965 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rnf13O54965 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Rnf13O54965 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Rnf13O54965 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC20.52■□□□□ 0.88
Rnf13O54965 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rnf13O54965 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Rnf13O54965 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Rnf13O54965 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Rnf13O54965 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rnf13O54965 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rnf13O54965 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rnf13O54965 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rnf13O54965 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Rnf13O54965 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
Rnf13O54965 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC20.49■□□□□ 0.87
Rnf13O54965 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC20.49■□□□□ 0.87
Rnf13O54965 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Rnf13O54965 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rnf13O54965 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Rnf13O54965 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Rnf13O54965 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rnf13O54965 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Rnf13O54965 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rnf13O54965 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rnf13O54965 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rnf13O54965 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rnf13O54965 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rnf13O54965 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
Rnf13O54965 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rnf13O54965 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rnf13O54965 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rnf13O54965 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rnf13O54965 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rnf13O54965 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Rnf13O54965 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Rnf13O54965 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rnf13O54965 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rnf13O54965 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rnf13O54965 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC20.45■□□□□ 0.86
Rnf13O54965 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Rnf13O54965 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rnf13O54965 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC20.45■□□□□ 0.86
Rnf13O54965 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC20.45■□□□□ 0.86
Rnf13O54965 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rnf13O54965 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rnf13O54965 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rnf13O54965 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rnf13O54965 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rnf13O54965 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC20.44■□□□□ 0.86
Rnf13O54965 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rnf13O54965 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC20.44■□□□□ 0.86
Rnf13O54965 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rnf13O54965 Gm4419-202ENSMUST00000226239 1431 ntBASIC20.44■□□□□ 0.86
Rnf13O54965 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Rnf13O54965 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Rnf13O54965 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC20.43■□□□□ 0.86
Rnf13O54965 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Rnf13O54965 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Rnf13O54965 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rnf13O54965 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rnf13O54965 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Rnf13O54965 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Rnf13O54965 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rnf13O54965 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Rnf13O54965 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Rnf13O54965 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rnf13O54965 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Rnf13O54965 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rnf13O54965 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rnf13O54965 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rnf13O54965 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rnf13O54965 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Rnf13O54965 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rnf13O54965 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rnf13O54965 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rnf13O54965 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rnf13O54965 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rnf13O54965 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rnf13O54965 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC20.4■□□□□ 0.86
Rnf13O54965 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Rnf13O54965 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Rnf13O54965 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
Rnf13O54965 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rnf13O54965 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rnf13O54965 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rnf13O54965 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC20.38■□□□□ 0.85
Rnf13O54965 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Rnf13O54965 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rnf13O54965 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rnf13O54965 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rnf13O54965 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC20.37■□□□□ 0.85
Rnf13O54965 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rnf13O54965 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rnf13O54965 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Rnf13O54965 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Rnf13O54965 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rnf13O54965 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 49.1 ms