Protein–RNA interactions for Protein: O54908

Dkk1, Dickkopf-related protein 1, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dkk1O54908 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Dkk1O54908 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Dkk1O54908 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC19.57■□□□□ 0.72
Dkk1O54908 AC153911.1-201ENSMUST00000220378 758 ntBASIC19.57■□□□□ 0.72
Dkk1O54908 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Dkk1O54908 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Dkk1O54908 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Dkk1O54908 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC19.56■□□□□ 0.72
Dkk1O54908 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Dkk1O54908 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Dkk1O54908 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Dkk1O54908 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Dkk1O54908 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Dkk1O54908 Gm45691-201ENSMUST00000206905 1120 ntBASIC19.55■□□□□ 0.72
Dkk1O54908 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Dkk1O54908 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC19.55■□□□□ 0.72
Dkk1O54908 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Dkk1O54908 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Dkk1O54908 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Dkk1O54908 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC19.53■□□□□ 0.72
Dkk1O54908 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Dkk1O54908 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC19.53■□□□□ 0.72
Dkk1O54908 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Dkk1O54908 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Dkk1O54908 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
Dkk1O54908 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Dkk1O54908 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Dkk1O54908 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Dkk1O54908 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Dkk1O54908 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Dkk1O54908 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Dkk1O54908 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Dkk1O54908 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Dkk1O54908 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Dkk1O54908 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Dkk1O54908 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC19.51■□□□□ 0.71
Dkk1O54908 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC19.51■□□□□ 0.71
Dkk1O54908 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
Dkk1O54908 Gm18558-201ENSMUST00000186253 1214 ntBASIC19.51■□□□□ 0.71
Dkk1O54908 Gm43416-201ENSMUST00000201916 1015 ntBASIC19.51■□□□□ 0.71
Dkk1O54908 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Dkk1O54908 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Dkk1O54908 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Dkk1O54908 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Dkk1O54908 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Dkk1O54908 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Dkk1O54908 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Dkk1O54908 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Dkk1O54908 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC19.5■□□□□ 0.71
Dkk1O54908 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Dkk1O54908 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Dkk1O54908 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Dkk1O54908 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Dkk1O54908 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Dkk1O54908 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC19.48■□□□□ 0.71
Dkk1O54908 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Dkk1O54908 Terc-201ENSMUST00000082862 423 ntBASIC19.48■□□□□ 0.71
Dkk1O54908 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Dkk1O54908 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Dkk1O54908 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC19.47■□□□□ 0.71
Dkk1O54908 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Dkk1O54908 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Dkk1O54908 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Dkk1O54908 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Dkk1O54908 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Dkk1O54908 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Dkk1O54908 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Dkk1O54908 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Dkk1O54908 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Dkk1O54908 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Dkk1O54908 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Dkk1O54908 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC19.44■□□□□ 0.7
Dkk1O54908 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Dkk1O54908 Gm11175-201ENSMUST00000116172 543 ntBASIC19.44■□□□□ 0.7
Dkk1O54908 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Dkk1O54908 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC19.44■□□□□ 0.7
Dkk1O54908 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Dkk1O54908 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
Dkk1O54908 Gm42699-201ENSMUST00000198104 1657 ntBASIC19.43■□□□□ 0.7
Dkk1O54908 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC19.43■□□□□ 0.7
Dkk1O54908 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Dkk1O54908 Trmt13-210ENSMUST00000198454 880 ntBASIC19.43■□□□□ 0.7
Dkk1O54908 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Dkk1O54908 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Dkk1O54908 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
Dkk1O54908 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Dkk1O54908 Gm9910-201ENSMUST00000195385 1550 ntBASIC19.42■□□□□ 0.7
Dkk1O54908 Scarna2-201ENSMUST00000157560 414 ntBASIC19.42■□□□□ 0.7
Dkk1O54908 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Dkk1O54908 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Dkk1O54908 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Dkk1O54908 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Dkk1O54908 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Dkk1O54908 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Dkk1O54908 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Dkk1O54908 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Dkk1O54908 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Dkk1O54908 Gm9806-201ENSMUST00000051080 552 ntBASIC19.4■□□□□ 0.7
Dkk1O54908 Gm25007-201ENSMUST00000083808 133 ntBASIC19.4■□□□□ 0.7
Dkk1O54908 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 14.9 ms