Protein–RNA interactions for Protein: O35137

Alx4, Homeobox protein aristaless-like 4, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx4O35137 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Alx4O35137 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC20.28■□□□□ 0.84
Alx4O35137 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Alx4O35137 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Alx4O35137 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Alx4O35137 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.83
Alx4O35137 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Alx4O35137 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC20.26■□□□□ 0.83
Alx4O35137 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Alx4O35137 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC20.26■□□□□ 0.83
Alx4O35137 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Alx4O35137 H3f3aos-201ENSMUST00000097448 2905 ntBASIC20.26■□□□□ 0.83
Alx4O35137 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Alx4O35137 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Alx4O35137 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Alx4O35137 Gm20634-201ENSMUST00000090779 2956 ntBASIC20.25■□□□□ 0.83
Alx4O35137 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Alx4O35137 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Alx4O35137 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
Alx4O35137 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Alx4O35137 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Alx4O35137 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Alx4O35137 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
Alx4O35137 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Alx4O35137 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Alx4O35137 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Alx4O35137 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Alx4O35137 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Alx4O35137 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Alx4O35137 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Alx4O35137 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Alx4O35137 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Alx4O35137 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Alx4O35137 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Alx4O35137 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Alx4O35137 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Alx4O35137 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Alx4O35137 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC20.21■□□□□ 0.83
Alx4O35137 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC20.21■□□□□ 0.83
Alx4O35137 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC20.21■□□□□ 0.83
Alx4O35137 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Alx4O35137 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Alx4O35137 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Alx4O35137 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Alx4O35137 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Alx4O35137 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Alx4O35137 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Alx4O35137 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Alx4O35137 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC20.19■□□□□ 0.82
Alx4O35137 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Alx4O35137 Gm37136-201ENSMUST00000194368 194 ntBASIC20.19■□□□□ 0.82
Alx4O35137 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Alx4O35137 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC20.18■□□□□ 0.82
Alx4O35137 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Alx4O35137 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Alx4O35137 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Alx4O35137 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Alx4O35137 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Alx4O35137 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Alx4O35137 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Alx4O35137 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Alx4O35137 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Alx4O35137 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Alx4O35137 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Alx4O35137 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Alx4O35137 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Alx4O35137 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Alx4O35137 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Alx4O35137 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Alx4O35137 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Alx4O35137 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Alx4O35137 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Alx4O35137 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Alx4O35137 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC20.15■□□□□ 0.82
Alx4O35137 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Alx4O35137 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Alx4O35137 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Alx4O35137 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Alx4O35137 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Alx4O35137 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC20.14■□□□□ 0.81
Alx4O35137 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC20.14■□□□□ 0.81
Alx4O35137 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
Alx4O35137 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Alx4O35137 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
Alx4O35137 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC20.12■□□□□ 0.81
Alx4O35137 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Alx4O35137 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC20.12■□□□□ 0.81
Alx4O35137 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Alx4O35137 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Alx4O35137 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Alx4O35137 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Alx4O35137 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC20.11■□□□□ 0.81
Alx4O35137 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC20.11■□□□□ 0.81
Alx4O35137 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Alx4O35137 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Alx4O35137 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Alx4O35137 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Alx4O35137 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Alx4O35137 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Alx4O35137 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms