Protein–RNA interactions for Protein: O08604

Raet1c, Retinoic acid early-inducible protein 1-gamma, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raet1cO08604 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Raet1cO08604 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Raet1cO08604 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Raet1cO08604 Gm11599-201ENSMUST00000118720 878 ntBASIC20.25■□□□□ 0.83
Raet1cO08604 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Raet1cO08604 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC20.24■□□□□ 0.83
Raet1cO08604 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Raet1cO08604 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Raet1cO08604 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Raet1cO08604 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Raet1cO08604 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Raet1cO08604 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Raet1cO08604 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Raet1cO08604 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC20.22■□□□□ 0.83
Raet1cO08604 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Raet1cO08604 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Raet1cO08604 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Raet1cO08604 Gm4799-201ENSMUST00000095396 657 ntBASIC20.21■□□□□ 0.83
Raet1cO08604 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Raet1cO08604 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC20.21■□□□□ 0.83
Raet1cO08604 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Raet1cO08604 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Raet1cO08604 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Raet1cO08604 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Raet1cO08604 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Raet1cO08604 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Raet1cO08604 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Raet1cO08604 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Raet1cO08604 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Raet1cO08604 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC20.17■□□□□ 0.82
Raet1cO08604 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC20.17■□□□□ 0.82
Raet1cO08604 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC20.17■□□□□ 0.82
Raet1cO08604 Gm13889-201ENSMUST00000099689 1386 ntBASIC20.17■□□□□ 0.82
Raet1cO08604 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Raet1cO08604 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Raet1cO08604 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Raet1cO08604 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Raet1cO08604 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Raet1cO08604 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Raet1cO08604 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Raet1cO08604 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Raet1cO08604 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Raet1cO08604 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Raet1cO08604 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Raet1cO08604 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Raet1cO08604 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Raet1cO08604 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Raet1cO08604 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC20.12■□□□□ 0.81
Raet1cO08604 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
Raet1cO08604 Gm42699-201ENSMUST00000198104 1657 ntBASIC20.12■□□□□ 0.81
Raet1cO08604 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Raet1cO08604 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Raet1cO08604 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Raet1cO08604 Mir3960-201ENSMUST00000198213 73 ntBASIC20.1■□□□□ 0.81
Raet1cO08604 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
Raet1cO08604 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Raet1cO08604 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Raet1cO08604 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Raet1cO08604 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Raet1cO08604 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Raet1cO08604 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC20.09■□□□□ 0.81
Raet1cO08604 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Raet1cO08604 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Raet1cO08604 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Raet1cO08604 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
Raet1cO08604 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC20.08■□□□□ 0.8
Raet1cO08604 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Raet1cO08604 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Raet1cO08604 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC20.07■□□□□ 0.8
Raet1cO08604 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC20.07■□□□□ 0.8
Raet1cO08604 AC154454.1-201ENSMUST00000225253 216 ntBASIC20.07■□□□□ 0.8
Raet1cO08604 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC20.07■□□□□ 0.8
Raet1cO08604 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC20.07■□□□□ 0.8
Raet1cO08604 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Raet1cO08604 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Raet1cO08604 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Raet1cO08604 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Raet1cO08604 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Raet1cO08604 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Raet1cO08604 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Raet1cO08604 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Raet1cO08604 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC20.06■□□□□ 0.8
Raet1cO08604 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Raet1cO08604 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Raet1cO08604 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Raet1cO08604 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Raet1cO08604 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Raet1cO08604 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Raet1cO08604 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Raet1cO08604 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Raet1cO08604 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Raet1cO08604 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Raet1cO08604 Gm45364-201ENSMUST00000210883 159 ntBASIC20.04■□□□□ 0.8
Raet1cO08604 AC167019.3-201ENSMUST00000228225 1266 ntBASIC20.04■□□□□ 0.8
Raet1cO08604 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Raet1cO08604 Gm9812-201ENSMUST00000061934 968 ntBASIC20.04■□□□□ 0.8
Raet1cO08604 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC20.04■□□□□ 0.8
Raet1cO08604 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Raet1cO08604 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC20.04■□□□□ 0.8
Raet1cO08604 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms