Protein–RNA interactions for Protein: O08603

Raet1b, Retinoic acid early-inducible protein 1-beta, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raet1bO08603 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Raet1bO08603 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Raet1bO08603 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Raet1bO08603 Gm42699-201ENSMUST00000198104 1657 ntBASIC20.1■□□□□ 0.81
Raet1bO08603 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Raet1bO08603 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Raet1bO08603 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Raet1bO08603 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Raet1bO08603 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Raet1bO08603 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Raet1bO08603 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Raet1bO08603 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Raet1bO08603 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Raet1bO08603 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Raet1bO08603 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Raet1bO08603 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Raet1bO08603 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
Raet1bO08603 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC20.08■□□□□ 0.81
Raet1bO08603 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Raet1bO08603 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Raet1bO08603 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
Raet1bO08603 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Raet1bO08603 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Raet1bO08603 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Raet1bO08603 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Raet1bO08603 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Raet1bO08603 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Raet1bO08603 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Raet1bO08603 Mir3960-201ENSMUST00000198213 73 ntBASIC20.05■□□□□ 0.8
Raet1bO08603 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Raet1bO08603 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Raet1bO08603 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Raet1bO08603 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Raet1bO08603 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
Raet1bO08603 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Raet1bO08603 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Raet1bO08603 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Raet1bO08603 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Raet1bO08603 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Raet1bO08603 AC154454.1-201ENSMUST00000225253 216 ntBASIC20.02■□□□□ 0.8
Raet1bO08603 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
Raet1bO08603 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Raet1bO08603 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Raet1bO08603 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
Raet1bO08603 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Raet1bO08603 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Raet1bO08603 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Raet1bO08603 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Raet1bO08603 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Raet1bO08603 Il17rd-202ENSMUST00000223942 2186 ntBASIC20.01■□□□□ 0.79
Raet1bO08603 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC20■□□□□ 0.79
Raet1bO08603 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC20■□□□□ 0.79
Raet1bO08603 Gm45364-201ENSMUST00000210883 159 ntBASIC20■□□□□ 0.79
Raet1bO08603 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC20■□□□□ 0.79
Raet1bO08603 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Raet1bO08603 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Raet1bO08603 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Raet1bO08603 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC19.99■□□□□ 0.79
Raet1bO08603 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Raet1bO08603 AC167019.3-201ENSMUST00000228225 1266 ntBASIC19.99■□□□□ 0.79
Raet1bO08603 Gm9812-201ENSMUST00000061934 968 ntBASIC19.99■□□□□ 0.79
Raet1bO08603 Gm12818-201ENSMUST00000117562 1349 ntBASIC19.99■□□□□ 0.79
Raet1bO08603 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC19.99■□□□□ 0.79
Raet1bO08603 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC19.99■□□□□ 0.79
Raet1bO08603 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Raet1bO08603 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Raet1bO08603 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Raet1bO08603 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
Raet1bO08603 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Raet1bO08603 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
Raet1bO08603 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Raet1bO08603 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC19.98■□□□□ 0.79
Raet1bO08603 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC19.97■□□□□ 0.79
Raet1bO08603 AC122317.2-201ENSMUST00000218708 1248 ntBASIC19.97■□□□□ 0.79
Raet1bO08603 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Raet1bO08603 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC19.96■□□□□ 0.79
Raet1bO08603 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Raet1bO08603 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Raet1bO08603 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Raet1bO08603 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Raet1bO08603 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC19.95■□□□□ 0.78
Raet1bO08603 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Raet1bO08603 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Raet1bO08603 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC19.95■□□□□ 0.78
Raet1bO08603 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC19.94■□□□□ 0.78
Raet1bO08603 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Raet1bO08603 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Raet1bO08603 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Raet1bO08603 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Raet1bO08603 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Raet1bO08603 AC153911.1-201ENSMUST00000220378 758 ntBASIC19.93■□□□□ 0.78
Raet1bO08603 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Raet1bO08603 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Raet1bO08603 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Raet1bO08603 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Raet1bO08603 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Raet1bO08603 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Raet1bO08603 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Raet1bO08603 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC19.92■□□□□ 0.78
Raet1bO08603 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms