Protein–RNA interactions for Protein: J3QPK1

Gm21833, Predicted gene, 21833, mousemouse

Predictions only

Length 500 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm21833J3QPK1 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Gm21833J3QPK1 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Gm21833J3QPK1 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Gm21833J3QPK1 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC19.93■□□□□ 0.78
Gm21833J3QPK1 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Gm21833J3QPK1 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Gm21833J3QPK1 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Gm21833J3QPK1 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Gm21833J3QPK1 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Gm21833J3QPK1 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Gm21833J3QPK1 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC19.93■□□□□ 0.78
Gm21833J3QPK1 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Gm21833J3QPK1 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Gm21833J3QPK1 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
Gm21833J3QPK1 Gm30023-201ENSMUST00000197970 889 ntBASIC19.91■□□□□ 0.78
Gm21833J3QPK1 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Gm21833J3QPK1 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Gm21833J3QPK1 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Gm21833J3QPK1 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Gm21833J3QPK1 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Gm21833J3QPK1 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Gm21833J3QPK1 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Gm21833J3QPK1 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Gm21833J3QPK1 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Gm21833J3QPK1 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Gm21833J3QPK1 Gm38160-201ENSMUST00000193090 2499 ntBASIC19.87■□□□□ 0.77
Gm21833J3QPK1 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC19.87■□□□□ 0.77
Gm21833J3QPK1 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Gm21833J3QPK1 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Gm21833J3QPK1 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Gm21833J3QPK1 Gm37847-201ENSMUST00000192163 1497 ntBASIC19.86■□□□□ 0.77
Gm21833J3QPK1 Gm31748-201ENSMUST00000194938 1497 ntBASIC19.86■□□□□ 0.77
Gm21833J3QPK1 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Gm21833J3QPK1 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC19.86■□□□□ 0.77
Gm21833J3QPK1 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Gm21833J3QPK1 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Gm21833J3QPK1 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC19.85■□□□□ 0.77
Gm21833J3QPK1 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Gm21833J3QPK1 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Gm21833J3QPK1 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC19.85■□□□□ 0.77
Gm21833J3QPK1 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Gm21833J3QPK1 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Gm21833J3QPK1 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Gm21833J3QPK1 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Gm21833J3QPK1 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Gm21833J3QPK1 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Gm21833J3QPK1 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC19.84■□□□□ 0.77
Gm21833J3QPK1 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Gm21833J3QPK1 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Gm21833J3QPK1 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Gm21833J3QPK1 Particl-201ENSMUST00000205370 1560 ntBASIC19.83■□□□□ 0.77
Gm21833J3QPK1 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Gm21833J3QPK1 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
Gm21833J3QPK1 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Gm21833J3QPK1 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Gm21833J3QPK1 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC19.83■□□□□ 0.76
Gm21833J3QPK1 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Gm21833J3QPK1 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
Gm21833J3QPK1 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Gm21833J3QPK1 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Gm21833J3QPK1 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC19.82■□□□□ 0.76
Gm21833J3QPK1 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Gm21833J3QPK1 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Gm21833J3QPK1 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Gm21833J3QPK1 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Gm21833J3QPK1 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Gm21833J3QPK1 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC19.81■□□□□ 0.76
Gm21833J3QPK1 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Gm21833J3QPK1 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Gm21833J3QPK1 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Gm21833J3QPK1 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Gm21833J3QPK1 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Gm21833J3QPK1 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
Gm21833J3QPK1 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Gm21833J3QPK1 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Gm21833J3QPK1 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Gm21833J3QPK1 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Gm21833J3QPK1 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Gm21833J3QPK1 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Gm21833J3QPK1 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Gm21833J3QPK1 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Gm21833J3QPK1 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC19.79■□□□□ 0.76
Gm21833J3QPK1 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Gm21833J3QPK1 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Gm21833J3QPK1 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Gm21833J3QPK1 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Gm21833J3QPK1 Gm13042-201ENSMUST00000119244 1955 ntBASIC19.77■□□□□ 0.76
Gm21833J3QPK1 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Gm21833J3QPK1 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Gm21833J3QPK1 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC19.77■□□□□ 0.76
Gm21833J3QPK1 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Gm21833J3QPK1 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Gm21833J3QPK1 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Gm21833J3QPK1 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.75
Gm21833J3QPK1 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Gm21833J3QPK1 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Gm21833J3QPK1 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Gm21833J3QPK1 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Gm21833J3QPK1 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Gm21833J3QPK1 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 66.6 ms