Protein–RNA interactions for Protein: E9Q555

Rnf213, E3 ubiquitin-protein ligase RNF213, mousemouse

Known RBP Predictions only

Length 5,152 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf213E9Q555 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Rnf213E9Q555 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Rnf213E9Q555 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Rnf213E9Q555 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Rnf213E9Q555 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC11.58□□□□□ -0.56
Rnf213E9Q555 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC11.57□□□□□ -0.56
Rnf213E9Q555 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Rnf213E9Q555 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Rnf213E9Q555 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC11.57□□□□□ -0.56
Rnf213E9Q555 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Rnf213E9Q555 Etf1-202ENSMUST00000180351 108 ntBASIC11.57□□□□□ -0.56
Rnf213E9Q555 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Rnf213E9Q555 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Rnf213E9Q555 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Rnf213E9Q555 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Rnf213E9Q555 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Rnf213E9Q555 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC11.56□□□□□ -0.56
Rnf213E9Q555 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Rnf213E9Q555 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Rnf213E9Q555 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Rnf213E9Q555 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Rnf213E9Q555 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC11.55□□□□□ -0.56
Rnf213E9Q555 Terc-201ENSMUST00000082862 423 ntBASIC11.55□□□□□ -0.56
Rnf213E9Q555 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Rnf213E9Q555 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Rnf213E9Q555 Gm21956-201ENSMUST00000179946 522 ntBASIC11.54□□□□□ -0.56
Rnf213E9Q555 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rnf213E9Q555 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC11.54□□□□□ -0.56
Rnf213E9Q555 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Rnf213E9Q555 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rnf213E9Q555 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rnf213E9Q555 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Rnf213E9Q555 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rnf213E9Q555 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rnf213E9Q555 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC11.53□□□□□ -0.56
Rnf213E9Q555 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Rnf213E9Q555 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Rnf213E9Q555 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Rnf213E9Q555 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC11.52□□□□□ -0.56
Rnf213E9Q555 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Rnf213E9Q555 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rnf213E9Q555 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC11.52□□□□□ -0.57
Rnf213E9Q555 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Rnf213E9Q555 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rnf213E9Q555 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rnf213E9Q555 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Rnf213E9Q555 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rnf213E9Q555 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rnf213E9Q555 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC11.5□□□□□ -0.57
Rnf213E9Q555 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rnf213E9Q555 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Rnf213E9Q555 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC11.5□□□□□ -0.57
Rnf213E9Q555 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Rnf213E9Q555 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Rnf213E9Q555 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC11.5□□□□□ -0.57
Rnf213E9Q555 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC11.5□□□□□ -0.57
Rnf213E9Q555 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC11.49□□□□□ -0.57
Rnf213E9Q555 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rnf213E9Q555 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rnf213E9Q555 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC11.49□□□□□ -0.57
Rnf213E9Q555 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rnf213E9Q555 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Rnf213E9Q555 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Rnf213E9Q555 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rnf213E9Q555 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rnf213E9Q555 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rnf213E9Q555 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rnf213E9Q555 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC11.48□□□□□ -0.57
Rnf213E9Q555 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC11.48□□□□□ -0.57
Rnf213E9Q555 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC11.48□□□□□ -0.57
Rnf213E9Q555 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC11.48□□□□□ -0.57
Rnf213E9Q555 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Rnf213E9Q555 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Rnf213E9Q555 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rnf213E9Q555 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rnf213E9Q555 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rnf213E9Q555 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Rnf213E9Q555 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rnf213E9Q555 Gm43592-201ENSMUST00000196922 1165 ntBASIC11.47□□□□□ -0.57
Rnf213E9Q555 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC11.47□□□□□ -0.57
Rnf213E9Q555 Gm10232-201ENSMUST00000089221 720 ntBASIC11.47□□□□□ -0.57
Rnf213E9Q555 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Rnf213E9Q555 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rnf213E9Q555 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Rnf213E9Q555 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Rnf213E9Q555 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Rnf213E9Q555 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC11.46□□□□□ -0.57
Rnf213E9Q555 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Rnf213E9Q555 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Rnf213E9Q555 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC11.46□□□□□ -0.58
Rnf213E9Q555 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Rnf213E9Q555 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Rnf213E9Q555 Gm13241-201ENSMUST00000094493 780 ntBASIC11.46□□□□□ -0.58
Rnf213E9Q555 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Rnf213E9Q555 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Rnf213E9Q555 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Rnf213E9Q555 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Rnf213E9Q555 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Rnf213E9Q555 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Rnf213E9Q555 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC11.44□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms