Protein–RNA interactions for Protein: E9PXF0

Pcdh17, Protocadherin 17, mousemouse

Predictions only

Length 1,157 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh17E9PXF0 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Pcdh17E9PXF0 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Pcdh17E9PXF0 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Pcdh17E9PXF0 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC21.13■□□□□ 0.97
Pcdh17E9PXF0 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Pcdh17E9PXF0 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pcdh17E9PXF0 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Pcdh17E9PXF0 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC21.12■□□□□ 0.97
Pcdh17E9PXF0 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC21.12■□□□□ 0.97
Pcdh17E9PXF0 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC21.12■□□□□ 0.97
Pcdh17E9PXF0 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Pcdh17E9PXF0 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Pcdh17E9PXF0 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Pcdh17E9PXF0 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Pcdh17E9PXF0 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Pcdh17E9PXF0 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC21.11■□□□□ 0.97
Pcdh17E9PXF0 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Pcdh17E9PXF0 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Pcdh17E9PXF0 AC151971.4-201ENSMUST00000214717 704 ntBASIC21.11■□□□□ 0.97
Pcdh17E9PXF0 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Pcdh17E9PXF0 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC21.11■□□□□ 0.97
Pcdh17E9PXF0 Terc-201ENSMUST00000082862 423 ntBASIC21.11■□□□□ 0.97
Pcdh17E9PXF0 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC21.1■□□□□ 0.97
Pcdh17E9PXF0 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Pcdh17E9PXF0 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Pcdh17E9PXF0 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Pcdh17E9PXF0 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
Pcdh17E9PXF0 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Pcdh17E9PXF0 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
Pcdh17E9PXF0 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC21.08■□□□□ 0.96
Pcdh17E9PXF0 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Pcdh17E9PXF0 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Pcdh17E9PXF0 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC21.07■□□□□ 0.96
Pcdh17E9PXF0 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Pcdh17E9PXF0 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Pcdh17E9PXF0 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
Pcdh17E9PXF0 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Pcdh17E9PXF0 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC21.06■□□□□ 0.96
Pcdh17E9PXF0 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Pcdh17E9PXF0 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
Pcdh17E9PXF0 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Pcdh17E9PXF0 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Pcdh17E9PXF0 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC21.04■□□□□ 0.96
Pcdh17E9PXF0 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
Pcdh17E9PXF0 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Pcdh17E9PXF0 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC21.03■□□□□ 0.96
Pcdh17E9PXF0 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Pcdh17E9PXF0 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Pcdh17E9PXF0 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC21.03■□□□□ 0.96
Pcdh17E9PXF0 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Pcdh17E9PXF0 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Pcdh17E9PXF0 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
Pcdh17E9PXF0 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
Pcdh17E9PXF0 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Pcdh17E9PXF0 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Pcdh17E9PXF0 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC21.01■□□□□ 0.95
Pcdh17E9PXF0 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Pcdh17E9PXF0 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Pcdh17E9PXF0 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC21■□□□□ 0.95
Pcdh17E9PXF0 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Pcdh17E9PXF0 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Pcdh17E9PXF0 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Pcdh17E9PXF0 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Pcdh17E9PXF0 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Pcdh17E9PXF0 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC20.99■□□□□ 0.95
Pcdh17E9PXF0 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Pcdh17E9PXF0 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pcdh17E9PXF0 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdh17E9PXF0 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdh17E9PXF0 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdh17E9PXF0 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdh17E9PXF0 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC20.97■□□□□ 0.95
Pcdh17E9PXF0 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pcdh17E9PXF0 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC20.97■□□□□ 0.95
Pcdh17E9PXF0 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC20.97■□□□□ 0.95
Pcdh17E9PXF0 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pcdh17E9PXF0 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pcdh17E9PXF0 Gm4419-202ENSMUST00000226239 1431 ntBASIC20.96■□□□□ 0.95
Pcdh17E9PXF0 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pcdh17E9PXF0 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Pcdh17E9PXF0 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pcdh17E9PXF0 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pcdh17E9PXF0 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
Pcdh17E9PXF0 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
Pcdh17E9PXF0 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Pcdh17E9PXF0 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Pcdh17E9PXF0 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Pcdh17E9PXF0 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pcdh17E9PXF0 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pcdh17E9PXF0 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Pcdh17E9PXF0 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pcdh17E9PXF0 Gm5067-201ENSMUST00000170449 1009 ntBASIC20.94■□□□□ 0.94
Pcdh17E9PXF0 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pcdh17E9PXF0 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC20.93■□□□□ 0.94
Pcdh17E9PXF0 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC20.93■□□□□ 0.94
Pcdh17E9PXF0 Gm10420-201ENSMUST00000121713 882 ntBASIC20.92■□□□□ 0.94
Pcdh17E9PXF0 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Pcdh17E9PXF0 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Pcdh17E9PXF0 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC20.92■□□□□ 0.94
Pcdh17E9PXF0 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms