Protein–RNA interactions for Protein: E9PWP7

Muc3, Mucin 3, intestinal, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Muc3E9PWP7 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Muc3E9PWP7 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Muc3E9PWP7 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Muc3E9PWP7 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Muc3E9PWP7 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Muc3E9PWP7 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Muc3E9PWP7 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Muc3E9PWP7 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC20.69■□□□□ 0.9
Muc3E9PWP7 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Muc3E9PWP7 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC20.68■□□□□ 0.9
Muc3E9PWP7 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Muc3E9PWP7 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Muc3E9PWP7 Gm4419-202ENSMUST00000226239 1431 ntBASIC20.68■□□□□ 0.9
Muc3E9PWP7 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Muc3E9PWP7 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Muc3E9PWP7 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Muc3E9PWP7 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Muc3E9PWP7 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Muc3E9PWP7 Gm5067-201ENSMUST00000170449 1009 ntBASIC20.66■□□□□ 0.9
Muc3E9PWP7 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Muc3E9PWP7 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Muc3E9PWP7 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Muc3E9PWP7 AC151971.4-201ENSMUST00000214717 704 ntBASIC20.65■□□□□ 0.9
Muc3E9PWP7 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Muc3E9PWP7 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Muc3E9PWP7 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Muc3E9PWP7 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Muc3E9PWP7 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC20.64■□□□□ 0.89
Muc3E9PWP7 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Muc3E9PWP7 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Muc3E9PWP7 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Muc3E9PWP7 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Muc3E9PWP7 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Muc3E9PWP7 Gm10420-201ENSMUST00000121713 882 ntBASIC20.63■□□□□ 0.89
Muc3E9PWP7 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Muc3E9PWP7 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Muc3E9PWP7 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Muc3E9PWP7 Gm44428-201ENSMUST00000204474 874 ntBASIC20.62■□□□□ 0.89
Muc3E9PWP7 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC20.61■□□□□ 0.89
Muc3E9PWP7 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Muc3E9PWP7 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC20.61■□□□□ 0.89
Muc3E9PWP7 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Muc3E9PWP7 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Muc3E9PWP7 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
Muc3E9PWP7 Fezf2-202ENSMUST00000224023 1917 ntBASIC20.61■□□□□ 0.89
Muc3E9PWP7 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC20.6■□□□□ 0.89
Muc3E9PWP7 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Muc3E9PWP7 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Muc3E9PWP7 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Muc3E9PWP7 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Muc3E9PWP7 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC20.6■□□□□ 0.89
Muc3E9PWP7 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC20.6■□□□□ 0.89
Muc3E9PWP7 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Muc3E9PWP7 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC20.58■□□□□ 0.89
Muc3E9PWP7 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Muc3E9PWP7 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
Muc3E9PWP7 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Muc3E9PWP7 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Muc3E9PWP7 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Muc3E9PWP7 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC20.57■□□□□ 0.88
Muc3E9PWP7 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Muc3E9PWP7 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Muc3E9PWP7 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Muc3E9PWP7 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Muc3E9PWP7 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC20.56■□□□□ 0.88
Muc3E9PWP7 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Muc3E9PWP7 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC20.54■□□□□ 0.88
Muc3E9PWP7 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Muc3E9PWP7 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Muc3E9PWP7 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Muc3E9PWP7 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Muc3E9PWP7 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Muc3E9PWP7 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Muc3E9PWP7 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Muc3E9PWP7 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Muc3E9PWP7 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Muc3E9PWP7 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Muc3E9PWP7 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Muc3E9PWP7 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC20.5■□□□□ 0.87
Muc3E9PWP7 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Muc3E9PWP7 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Muc3E9PWP7 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Muc3E9PWP7 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Muc3E9PWP7 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Muc3E9PWP7 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Muc3E9PWP7 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC20.49■□□□□ 0.87
Muc3E9PWP7 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Muc3E9PWP7 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Muc3E9PWP7 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Muc3E9PWP7 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC20.48■□□□□ 0.87
Muc3E9PWP7 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Muc3E9PWP7 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC20.48■□□□□ 0.87
Muc3E9PWP7 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Muc3E9PWP7 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Muc3E9PWP7 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Muc3E9PWP7 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Muc3E9PWP7 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Muc3E9PWP7 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Muc3E9PWP7 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC20.47■□□□□ 0.87
Muc3E9PWP7 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 13.2 ms