Protein–RNA interactions for Protein: D3YV89

Mmp27, Matrix metalloproteinase, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp27D3YV89 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Mmp27D3YV89 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Mmp27D3YV89 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Mmp27D3YV89 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Mmp27D3YV89 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Mmp27D3YV89 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Mmp27D3YV89 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Mmp27D3YV89 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Mmp27D3YV89 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC19.03■□□□□ 0.64
Mmp27D3YV89 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Mmp27D3YV89 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC19.03■□□□□ 0.64
Mmp27D3YV89 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Mmp27D3YV89 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Mmp27D3YV89 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Mmp27D3YV89 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
Mmp27D3YV89 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Mmp27D3YV89 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Mmp27D3YV89 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Mmp27D3YV89 Nkain2-201ENSMUST00000092602 558 ntBASIC19.02■□□□□ 0.64
Mmp27D3YV89 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Mmp27D3YV89 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Mmp27D3YV89 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Mmp27D3YV89 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Mmp27D3YV89 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Mmp27D3YV89 Gm8503-201ENSMUST00000118131 455 ntBASIC19.01■□□□□ 0.63
Mmp27D3YV89 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Mmp27D3YV89 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Mmp27D3YV89 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Mmp27D3YV89 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Mmp27D3YV89 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC19■□□□□ 0.63
Mmp27D3YV89 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC19■□□□□ 0.63
Mmp27D3YV89 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Mmp27D3YV89 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Mmp27D3YV89 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Mmp27D3YV89 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Mmp27D3YV89 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Mmp27D3YV89 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Mmp27D3YV89 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Mmp27D3YV89 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Mmp27D3YV89 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Mmp27D3YV89 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Mmp27D3YV89 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Mmp27D3YV89 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Mmp27D3YV89 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Mmp27D3YV89 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
Mmp27D3YV89 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Mmp27D3YV89 Gm42809-201ENSMUST00000198429 1138 ntBASIC18.97■□□□□ 0.63
Mmp27D3YV89 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC18.96■□□□□ 0.63
Mmp27D3YV89 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Mmp27D3YV89 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC18.96■□□□□ 0.63
Mmp27D3YV89 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Mmp27D3YV89 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Mmp27D3YV89 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Mmp27D3YV89 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC18.95■□□□□ 0.62
Mmp27D3YV89 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Mmp27D3YV89 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Mmp27D3YV89 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Mmp27D3YV89 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Mmp27D3YV89 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Mmp27D3YV89 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Mmp27D3YV89 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Mmp27D3YV89 Pcf11-205ENSMUST00000208255 1720 ntBASIC18.94■□□□□ 0.62
Mmp27D3YV89 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Mmp27D3YV89 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Mmp27D3YV89 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Mmp27D3YV89 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Mmp27D3YV89 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Mmp27D3YV89 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Mmp27D3YV89 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Mmp27D3YV89 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Mmp27D3YV89 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Mmp27D3YV89 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC18.93■□□□□ 0.62
Mmp27D3YV89 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Mmp27D3YV89 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
Mmp27D3YV89 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Mmp27D3YV89 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Mmp27D3YV89 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Mmp27D3YV89 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Mmp27D3YV89 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Mmp27D3YV89 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Mmp27D3YV89 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Mmp27D3YV89 Dmtn-209ENSMUST00000228295 2572 ntBASIC18.9■□□□□ 0.62
Mmp27D3YV89 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC18.9■□□□□ 0.62
Mmp27D3YV89 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Mmp27D3YV89 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Mmp27D3YV89 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Mmp27D3YV89 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
Mmp27D3YV89 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Mmp27D3YV89 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Mmp27D3YV89 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Mmp27D3YV89 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Mmp27D3YV89 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Mmp27D3YV89 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Mmp27D3YV89 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Mmp27D3YV89 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Mmp27D3YV89 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Mmp27D3YV89 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Mmp27D3YV89 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Mmp27D3YV89 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Mmp27D3YV89 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms