Protein–RNA interactions for Protein: D3YU81

Rfx8, DNA-binding protein RFX8, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx8D3YU81 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Rfx8D3YU81 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC24.03■■□□□ 1.44
Rfx8D3YU81 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC24.03■■□□□ 1.44
Rfx8D3YU81 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Rfx8D3YU81 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC24.02■■□□□ 1.44
Rfx8D3YU81 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Rfx8D3YU81 Gm12818-201ENSMUST00000117562 1349 ntBASIC24.02■■□□□ 1.44
Rfx8D3YU81 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC24.02■■□□□ 1.44
Rfx8D3YU81 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC24.01■■□□□ 1.43
Rfx8D3YU81 Gm6311-201ENSMUST00000073790 878 ntBASIC24.01■■□□□ 1.43
Rfx8D3YU81 Il17rd-202ENSMUST00000223942 2186 ntBASIC24.01■■□□□ 1.43
Rfx8D3YU81 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC24■■□□□ 1.43
Rfx8D3YU81 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC24■■□□□ 1.43
Rfx8D3YU81 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC24■■□□□ 1.43
Rfx8D3YU81 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC24■■□□□ 1.43
Rfx8D3YU81 Gm9812-201ENSMUST00000061934 968 ntBASIC24■■□□□ 1.43
Rfx8D3YU81 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC24■■□□□ 1.43
Rfx8D3YU81 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
Rfx8D3YU81 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
Rfx8D3YU81 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Rfx8D3YU81 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Rfx8D3YU81 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Rfx8D3YU81 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC23.98■■□□□ 1.43
Rfx8D3YU81 Gm45364-201ENSMUST00000210883 159 ntBASIC23.98■■□□□ 1.43
Rfx8D3YU81 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Rfx8D3YU81 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Rfx8D3YU81 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC23.96■■□□□ 1.43
Rfx8D3YU81 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Rfx8D3YU81 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC23.96■■□□□ 1.43
Rfx8D3YU81 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.43
Rfx8D3YU81 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC23.95■■□□□ 1.42
Rfx8D3YU81 Pkd1-207ENSMUST00000228550 1050 ntBASIC23.95■■□□□ 1.42
Rfx8D3YU81 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Rfx8D3YU81 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
Rfx8D3YU81 AC122317.2-201ENSMUST00000218708 1248 ntBASIC23.94■■□□□ 1.42
Rfx8D3YU81 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
Rfx8D3YU81 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC23.94■■□□□ 1.42
Rfx8D3YU81 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC23.93■■□□□ 1.42
Rfx8D3YU81 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Rfx8D3YU81 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
Rfx8D3YU81 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC23.92■■□□□ 1.42
Rfx8D3YU81 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Rfx8D3YU81 AC153911.1-201ENSMUST00000220378 758 ntBASIC23.92■■□□□ 1.42
Rfx8D3YU81 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC23.91■■□□□ 1.42
Rfx8D3YU81 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Rfx8D3YU81 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC23.9■■□□□ 1.42
Rfx8D3YU81 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC23.9■■□□□ 1.42
Rfx8D3YU81 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
Rfx8D3YU81 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Rfx8D3YU81 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC23.89■■□□□ 1.42
Rfx8D3YU81 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
Rfx8D3YU81 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC23.89■■□□□ 1.41
Rfx8D3YU81 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Rfx8D3YU81 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Rfx8D3YU81 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Rfx8D3YU81 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Rfx8D3YU81 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC23.88■■□□□ 1.41
Rfx8D3YU81 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC23.88■■□□□ 1.41
Rfx8D3YU81 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Rfx8D3YU81 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
Rfx8D3YU81 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Rfx8D3YU81 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Rfx8D3YU81 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC23.86■■□□□ 1.41
Rfx8D3YU81 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC23.86■■□□□ 1.41
Rfx8D3YU81 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Rfx8D3YU81 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
Rfx8D3YU81 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC23.86■■□□□ 1.41
Rfx8D3YU81 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Rfx8D3YU81 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Rfx8D3YU81 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC23.86■■□□□ 1.41
Rfx8D3YU81 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Rfx8D3YU81 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Rfx8D3YU81 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Rfx8D3YU81 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Rfx8D3YU81 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC23.84■■□□□ 1.41
Rfx8D3YU81 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
Rfx8D3YU81 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Rfx8D3YU81 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Rfx8D3YU81 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC23.83■■□□□ 1.41
Rfx8D3YU81 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
Rfx8D3YU81 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Rfx8D3YU81 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
Rfx8D3YU81 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC23.83■■□□□ 1.41
Rfx8D3YU81 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Rfx8D3YU81 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Rfx8D3YU81 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Rfx8D3YU81 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Rfx8D3YU81 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC23.82■■□□□ 1.4
Rfx8D3YU81 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Rfx8D3YU81 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Rfx8D3YU81 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC23.81■■□□□ 1.4
Rfx8D3YU81 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
Rfx8D3YU81 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC23.81■■□□□ 1.4
Rfx8D3YU81 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
Rfx8D3YU81 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Rfx8D3YU81 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Rfx8D3YU81 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Rfx8D3YU81 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Rfx8D3YU81 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC23.8■■□□□ 1.4
Rfx8D3YU81 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms