Protein–RNA interactions for Protein: A1L3P4

Slc9a6, Sodium/hydrogen exchanger, mousemouse

Predictions only

Length 702 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc9a6A1L3P4 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Slc9a6A1L3P4 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Slc9a6A1L3P4 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Slc9a6A1L3P4 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Slc9a6A1L3P4 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Slc9a6A1L3P4 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
Slc9a6A1L3P4 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Slc9a6A1L3P4 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Slc9a6A1L3P4 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Slc9a6A1L3P4 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
Slc9a6A1L3P4 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
Slc9a6A1L3P4 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
Slc9a6A1L3P4 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC21.21■□□□□ 0.99
Slc9a6A1L3P4 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
Slc9a6A1L3P4 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Slc9a6A1L3P4 Gm11599-201ENSMUST00000118720 878 ntBASIC21.21■□□□□ 0.99
Slc9a6A1L3P4 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Slc9a6A1L3P4 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Slc9a6A1L3P4 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
Slc9a6A1L3P4 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Slc9a6A1L3P4 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
Slc9a6A1L3P4 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Slc9a6A1L3P4 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Slc9a6A1L3P4 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Slc9a6A1L3P4 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Slc9a6A1L3P4 Gm4799-201ENSMUST00000095396 657 ntBASIC21.19■□□□□ 0.98
Slc9a6A1L3P4 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Slc9a6A1L3P4 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Slc9a6A1L3P4 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Slc9a6A1L3P4 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Slc9a6A1L3P4 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Slc9a6A1L3P4 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC21.18■□□□□ 0.98
Slc9a6A1L3P4 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Slc9a6A1L3P4 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Slc9a6A1L3P4 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Slc9a6A1L3P4 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Slc9a6A1L3P4 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Slc9a6A1L3P4 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Slc9a6A1L3P4 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Slc9a6A1L3P4 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
Slc9a6A1L3P4 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC21.16■□□□□ 0.98
Slc9a6A1L3P4 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Slc9a6A1L3P4 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Slc9a6A1L3P4 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Slc9a6A1L3P4 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC21.16■□□□□ 0.98
Slc9a6A1L3P4 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Slc9a6A1L3P4 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
Slc9a6A1L3P4 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Slc9a6A1L3P4 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Slc9a6A1L3P4 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC21.15■□□□□ 0.98
Slc9a6A1L3P4 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Slc9a6A1L3P4 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Slc9a6A1L3P4 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.98
Slc9a6A1L3P4 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Slc9a6A1L3P4 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Slc9a6A1L3P4 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Slc9a6A1L3P4 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Slc9a6A1L3P4 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Slc9a6A1L3P4 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Slc9a6A1L3P4 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
Slc9a6A1L3P4 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC21.12■□□□□ 0.97
Slc9a6A1L3P4 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Slc9a6A1L3P4 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Slc9a6A1L3P4 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Slc9a6A1L3P4 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Slc9a6A1L3P4 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC21.11■□□□□ 0.97
Slc9a6A1L3P4 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Slc9a6A1L3P4 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Slc9a6A1L3P4 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC21.1■□□□□ 0.97
Slc9a6A1L3P4 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Slc9a6A1L3P4 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Slc9a6A1L3P4 Gm13889-201ENSMUST00000099689 1386 ntBASIC21.1■□□□□ 0.97
Slc9a6A1L3P4 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Slc9a6A1L3P4 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Slc9a6A1L3P4 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
Slc9a6A1L3P4 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Slc9a6A1L3P4 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Slc9a6A1L3P4 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Slc9a6A1L3P4 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Slc9a6A1L3P4 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC21.07■□□□□ 0.96
Slc9a6A1L3P4 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Slc9a6A1L3P4 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Slc9a6A1L3P4 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Slc9a6A1L3P4 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Slc9a6A1L3P4 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Slc9a6A1L3P4 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Slc9a6A1L3P4 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Slc9a6A1L3P4 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC21.06■□□□□ 0.96
Slc9a6A1L3P4 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Slc9a6A1L3P4 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Slc9a6A1L3P4 Mir3960-201ENSMUST00000198213 73 ntBASIC21.05■□□□□ 0.96
Slc9a6A1L3P4 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
Slc9a6A1L3P4 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Slc9a6A1L3P4 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Slc9a6A1L3P4 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Slc9a6A1L3P4 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC21.04■□□□□ 0.96
Slc9a6A1L3P4 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
Slc9a6A1L3P4 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Slc9a6A1L3P4 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Slc9a6A1L3P4 Gm42699-201ENSMUST00000198104 1657 ntBASIC21.02■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 15.2 ms