Protein–RNA interactions for Protein: A0A140T8V5

Pcna-ps2, Proliferating cell nuclear antigen, mousemouse

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcna-ps2A0A140T8V5 Gm11599-201ENSMUST00000118720 878 ntBASIC22.66■■□□□ 1.22
Pcna-ps2A0A140T8V5 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Pcna-ps2A0A140T8V5 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Pcna-ps2A0A140T8V5 Gm37136-201ENSMUST00000194368 194 ntBASIC22.65■■□□□ 1.22
Pcna-ps2A0A140T8V5 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Pcna-ps2A0A140T8V5 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC22.64■■□□□ 1.21
Pcna-ps2A0A140T8V5 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Pcna-ps2A0A140T8V5 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Pcna-ps2A0A140T8V5 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Pcna-ps2A0A140T8V5 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Pcna-ps2A0A140T8V5 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Pcna-ps2A0A140T8V5 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Pcna-ps2A0A140T8V5 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Pcna-ps2A0A140T8V5 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Pcna-ps2A0A140T8V5 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC22.62■■□□□ 1.21
Pcna-ps2A0A140T8V5 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
Pcna-ps2A0A140T8V5 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC22.61■■□□□ 1.21
Pcna-ps2A0A140T8V5 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Pcna-ps2A0A140T8V5 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC22.61■■□□□ 1.21
Pcna-ps2A0A140T8V5 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Pcna-ps2A0A140T8V5 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC22.61■■□□□ 1.21
Pcna-ps2A0A140T8V5 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Pcna-ps2A0A140T8V5 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC22.6■■□□□ 1.21
Pcna-ps2A0A140T8V5 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Pcna-ps2A0A140T8V5 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC22.59■■□□□ 1.21
Pcna-ps2A0A140T8V5 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Pcna-ps2A0A140T8V5 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC22.59■■□□□ 1.21
Pcna-ps2A0A140T8V5 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Pcna-ps2A0A140T8V5 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Pcna-ps2A0A140T8V5 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC22.59■■□□□ 1.21
Pcna-ps2A0A140T8V5 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Pcna-ps2A0A140T8V5 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC22.58■■□□□ 1.21
Pcna-ps2A0A140T8V5 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Pcna-ps2A0A140T8V5 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Pcna-ps2A0A140T8V5 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Pcna-ps2A0A140T8V5 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC22.58■■□□□ 1.21
Pcna-ps2A0A140T8V5 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
Pcna-ps2A0A140T8V5 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC22.58■■□□□ 1.2
Pcna-ps2A0A140T8V5 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
Pcna-ps2A0A140T8V5 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC22.58■■□□□ 1.2
Pcna-ps2A0A140T8V5 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
Pcna-ps2A0A140T8V5 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC22.57■■□□□ 1.2
Pcna-ps2A0A140T8V5 Gm14121-201ENSMUST00000121441 1380 ntBASIC22.57■■□□□ 1.2
Pcna-ps2A0A140T8V5 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC22.56■■□□□ 1.2
Pcna-ps2A0A140T8V5 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Pcna-ps2A0A140T8V5 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Pcna-ps2A0A140T8V5 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC22.56■■□□□ 1.2
Pcna-ps2A0A140T8V5 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Pcna-ps2A0A140T8V5 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Pcna-ps2A0A140T8V5 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Pcna-ps2A0A140T8V5 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Pcna-ps2A0A140T8V5 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Pcna-ps2A0A140T8V5 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC22.55■■□□□ 1.2
Pcna-ps2A0A140T8V5 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC22.55■■□□□ 1.2
Pcna-ps2A0A140T8V5 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Pcna-ps2A0A140T8V5 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Pcna-ps2A0A140T8V5 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Pcna-ps2A0A140T8V5 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Pcna-ps2A0A140T8V5 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC22.54■■□□□ 1.2
Pcna-ps2A0A140T8V5 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Pcna-ps2A0A140T8V5 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC22.54■■□□□ 1.2
Pcna-ps2A0A140T8V5 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Pcna-ps2A0A140T8V5 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Pcna-ps2A0A140T8V5 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Pcna-ps2A0A140T8V5 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Pcna-ps2A0A140T8V5 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Pcna-ps2A0A140T8V5 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Pcna-ps2A0A140T8V5 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Pcna-ps2A0A140T8V5 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC22.51■■□□□ 1.19
Pcna-ps2A0A140T8V5 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC22.5■■□□□ 1.19
Pcna-ps2A0A140T8V5 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
Pcna-ps2A0A140T8V5 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC22.5■■□□□ 1.19
Pcna-ps2A0A140T8V5 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC22.5■■□□□ 1.19
Pcna-ps2A0A140T8V5 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC22.49■■□□□ 1.19
Pcna-ps2A0A140T8V5 Gm4799-201ENSMUST00000095396 657 ntBASIC22.49■■□□□ 1.19
Pcna-ps2A0A140T8V5 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC22.49■■□□□ 1.19
Pcna-ps2A0A140T8V5 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Pcna-ps2A0A140T8V5 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Pcna-ps2A0A140T8V5 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Pcna-ps2A0A140T8V5 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
Pcna-ps2A0A140T8V5 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Pcna-ps2A0A140T8V5 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Pcna-ps2A0A140T8V5 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC22.47■■□□□ 1.19
Pcna-ps2A0A140T8V5 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC22.47■■□□□ 1.19
Pcna-ps2A0A140T8V5 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Pcna-ps2A0A140T8V5 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC22.47■■□□□ 1.19
Pcna-ps2A0A140T8V5 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Pcna-ps2A0A140T8V5 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC22.47■■□□□ 1.19
Pcna-ps2A0A140T8V5 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Pcna-ps2A0A140T8V5 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC22.47■■□□□ 1.19
Pcna-ps2A0A140T8V5 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
Pcna-ps2A0A140T8V5 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Pcna-ps2A0A140T8V5 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC22.46■■□□□ 1.19
Pcna-ps2A0A140T8V5 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Pcna-ps2A0A140T8V5 Gm42699-201ENSMUST00000198104 1657 ntBASIC22.46■■□□□ 1.19
Pcna-ps2A0A140T8V5 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Pcna-ps2A0A140T8V5 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC22.45■■□□□ 1.18
Pcna-ps2A0A140T8V5 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC22.45■■□□□ 1.18
Pcna-ps2A0A140T8V5 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Pcna-ps2A0A140T8V5 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms