Protein–RNA interactions for Protein: A0A140T8M6

Igkv3-5, Immunoglobulin kappa chain variable 3-5 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv3-5A0A140T8M6 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Igkv3-5A0A140T8M6 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
Igkv3-5A0A140T8M6 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Igkv3-5A0A140T8M6 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Igkv3-5A0A140T8M6 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Igkv3-5A0A140T8M6 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Igkv3-5A0A140T8M6 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Igkv3-5A0A140T8M6 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Igkv3-5A0A140T8M6 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Igkv3-5A0A140T8M6 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Igkv3-5A0A140T8M6 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Igkv3-5A0A140T8M6 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Igkv3-5A0A140T8M6 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Igkv3-5A0A140T8M6 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Igkv3-5A0A140T8M6 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC14.29□□□□□ -0.12
Igkv3-5A0A140T8M6 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Igkv3-5A0A140T8M6 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Igkv3-5A0A140T8M6 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Igkv3-5A0A140T8M6 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Igkv3-5A0A140T8M6 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Igkv3-5A0A140T8M6 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Igkv3-5A0A140T8M6 Gm30023-201ENSMUST00000197970 889 ntBASIC14.28□□□□□ -0.12
Igkv3-5A0A140T8M6 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Igkv3-5A0A140T8M6 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC14.28□□□□□ -0.12
Igkv3-5A0A140T8M6 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Igkv3-5A0A140T8M6 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Igkv3-5A0A140T8M6 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC14.27□□□□□ -0.12
Igkv3-5A0A140T8M6 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Igkv3-5A0A140T8M6 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.13
Igkv3-5A0A140T8M6 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Igkv3-5A0A140T8M6 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Igkv3-5A0A140T8M6 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Igkv3-5A0A140T8M6 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Igkv3-5A0A140T8M6 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Igkv3-5A0A140T8M6 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Igkv3-5A0A140T8M6 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Igkv3-5A0A140T8M6 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Igkv3-5A0A140T8M6 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Igkv3-5A0A140T8M6 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Igkv3-5A0A140T8M6 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC14.25□□□□□ -0.13
Igkv3-5A0A140T8M6 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Igkv3-5A0A140T8M6 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Igkv3-5A0A140T8M6 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Igkv3-5A0A140T8M6 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Igkv3-5A0A140T8M6 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Igkv3-5A0A140T8M6 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Igkv3-5A0A140T8M6 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Igkv3-5A0A140T8M6 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Igkv3-5A0A140T8M6 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Igkv3-5A0A140T8M6 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Igkv3-5A0A140T8M6 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Igkv3-5A0A140T8M6 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC14.24□□□□□ -0.13
Igkv3-5A0A140T8M6 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Igkv3-5A0A140T8M6 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Igkv3-5A0A140T8M6 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Igkv3-5A0A140T8M6 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Igkv3-5A0A140T8M6 Gm37847-201ENSMUST00000192163 1497 ntBASIC14.23□□□□□ -0.13
Igkv3-5A0A140T8M6 Gm31748-201ENSMUST00000194938 1497 ntBASIC14.23□□□□□ -0.13
Igkv3-5A0A140T8M6 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Igkv3-5A0A140T8M6 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Igkv3-5A0A140T8M6 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Igkv3-5A0A140T8M6 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Igkv3-5A0A140T8M6 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Igkv3-5A0A140T8M6 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Igkv3-5A0A140T8M6 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Igkv3-5A0A140T8M6 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Igkv3-5A0A140T8M6 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Igkv3-5A0A140T8M6 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Igkv3-5A0A140T8M6 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Igkv3-5A0A140T8M6 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.13
Igkv3-5A0A140T8M6 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Igkv3-5A0A140T8M6 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Igkv3-5A0A140T8M6 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Igkv3-5A0A140T8M6 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Igkv3-5A0A140T8M6 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Igkv3-5A0A140T8M6 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Igkv3-5A0A140T8M6 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Igkv3-5A0A140T8M6 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Igkv3-5A0A140T8M6 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC14.19□□□□□ -0.14
Igkv3-5A0A140T8M6 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
Igkv3-5A0A140T8M6 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Igkv3-5A0A140T8M6 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Igkv3-5A0A140T8M6 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Igkv3-5A0A140T8M6 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Igkv3-5A0A140T8M6 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Igkv3-5A0A140T8M6 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Igkv3-5A0A140T8M6 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC14.18□□□□□ -0.14
Igkv3-5A0A140T8M6 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Igkv3-5A0A140T8M6 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC14.18□□□□□ -0.14
Igkv3-5A0A140T8M6 Particl-201ENSMUST00000205370 1560 ntBASIC14.17□□□□□ -0.14
Igkv3-5A0A140T8M6 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Igkv3-5A0A140T8M6 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Igkv3-5A0A140T8M6 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Igkv3-5A0A140T8M6 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Igkv3-5A0A140T8M6 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Igkv3-5A0A140T8M6 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Igkv3-5A0A140T8M6 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC14.16□□□□□ -0.14
Igkv3-5A0A140T8M6 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Igkv3-5A0A140T8M6 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Igkv3-5A0A140T8M6 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms