Protein–RNA interactions for Protein: A0A0G2JGD3

Tmem116, Transmembrane protein 116 (Fragment), mousemouse

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmem116A0A0G2JGD3 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Tmem116A0A0G2JGD3 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Tmem116A0A0G2JGD3 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Tmem116A0A0G2JGD3 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Tmem116A0A0G2JGD3 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Tmem116A0A0G2JGD3 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Tmem116A0A0G2JGD3 Gm9910-201ENSMUST00000195385 1550 ntBASIC18.93■□□□□ 0.62
Tmem116A0A0G2JGD3 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC18.92■□□□□ 0.62
Tmem116A0A0G2JGD3 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Tmem116A0A0G2JGD3 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Tmem116A0A0G2JGD3 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Tmem116A0A0G2JGD3 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Tmem116A0A0G2JGD3 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Tmem116A0A0G2JGD3 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Tmem116A0A0G2JGD3 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Tmem116A0A0G2JGD3 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC18.91■□□□□ 0.62
Tmem116A0A0G2JGD3 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Tmem116A0A0G2JGD3 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Tmem116A0A0G2JGD3 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Tmem116A0A0G2JGD3 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC18.9■□□□□ 0.62
Tmem116A0A0G2JGD3 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Tmem116A0A0G2JGD3 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Tmem116A0A0G2JGD3 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Tmem116A0A0G2JGD3 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Tmem116A0A0G2JGD3 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Tmem116A0A0G2JGD3 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Tmem116A0A0G2JGD3 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC18.89■□□□□ 0.61
Tmem116A0A0G2JGD3 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Tmem116A0A0G2JGD3 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Tmem116A0A0G2JGD3 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Tmem116A0A0G2JGD3 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Tmem116A0A0G2JGD3 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Tmem116A0A0G2JGD3 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Tmem116A0A0G2JGD3 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Tmem116A0A0G2JGD3 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Tmem116A0A0G2JGD3 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Tmem116A0A0G2JGD3 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Tmem116A0A0G2JGD3 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Tmem116A0A0G2JGD3 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Tmem116A0A0G2JGD3 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC18.85■□□□□ 0.61
Tmem116A0A0G2JGD3 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Tmem116A0A0G2JGD3 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Tmem116A0A0G2JGD3 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC18.85■□□□□ 0.61
Tmem116A0A0G2JGD3 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Tmem116A0A0G2JGD3 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Tmem116A0A0G2JGD3 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Tmem116A0A0G2JGD3 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Tmem116A0A0G2JGD3 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Tmem116A0A0G2JGD3 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Tmem116A0A0G2JGD3 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC18.84■□□□□ 0.61
Tmem116A0A0G2JGD3 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC18.84■□□□□ 0.61
Tmem116A0A0G2JGD3 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC18.84■□□□□ 0.61
Tmem116A0A0G2JGD3 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Tmem116A0A0G2JGD3 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Tmem116A0A0G2JGD3 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Tmem116A0A0G2JGD3 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Tmem116A0A0G2JGD3 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Tmem116A0A0G2JGD3 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC18.83■□□□□ 0.6
Tmem116A0A0G2JGD3 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC18.82■□□□□ 0.6
Tmem116A0A0G2JGD3 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tmem116A0A0G2JGD3 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Tmem116A0A0G2JGD3 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Tmem116A0A0G2JGD3 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Tmem116A0A0G2JGD3 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tmem116A0A0G2JGD3 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tmem116A0A0G2JGD3 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Tmem116A0A0G2JGD3 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tmem116A0A0G2JGD3 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Tmem116A0A0G2JGD3 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tmem116A0A0G2JGD3 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tmem116A0A0G2JGD3 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tmem116A0A0G2JGD3 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tmem116A0A0G2JGD3 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tmem116A0A0G2JGD3 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Tmem116A0A0G2JGD3 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tmem116A0A0G2JGD3 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Tmem116A0A0G2JGD3 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC18.8■□□□□ 0.6
Tmem116A0A0G2JGD3 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC18.8■□□□□ 0.6
Tmem116A0A0G2JGD3 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tmem116A0A0G2JGD3 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC18.8■□□□□ 0.6
Tmem116A0A0G2JGD3 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC18.8■□□□□ 0.6
Tmem116A0A0G2JGD3 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tmem116A0A0G2JGD3 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
Tmem116A0A0G2JGD3 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Tmem116A0A0G2JGD3 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Tmem116A0A0G2JGD3 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tmem116A0A0G2JGD3 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Tmem116A0A0G2JGD3 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tmem116A0A0G2JGD3 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Tmem116A0A0G2JGD3 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tmem116A0A0G2JGD3 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Tmem116A0A0G2JGD3 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
Tmem116A0A0G2JGD3 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Tmem116A0A0G2JGD3 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC18.77■□□□□ 0.6
Tmem116A0A0G2JGD3 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC18.77■□□□□ 0.6
Tmem116A0A0G2JGD3 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Tmem116A0A0G2JGD3 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tmem116A0A0G2JGD3 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tmem116A0A0G2JGD3 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tmem116A0A0G2JGD3 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 68.2 ms