Protein–RNA interactions for Protein: A0A0B4J1K2

Trav9-4, T cell receptor alpha variable 9-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-4A0A0B4J1K2 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Trav9-4A0A0B4J1K2 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trav9-4A0A0B4J1K2 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trav9-4A0A0B4J1K2 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Trav9-4A0A0B4J1K2 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trav9-4A0A0B4J1K2 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Trav9-4A0A0B4J1K2 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trav9-4A0A0B4J1K2 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trav9-4A0A0B4J1K2 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trav9-4A0A0B4J1K2 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC16.99■□□□□ 0.31
Trav9-4A0A0B4J1K2 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trav9-4A0A0B4J1K2 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Trav9-4A0A0B4J1K2 Pkd1-207ENSMUST00000228550 1050 ntBASIC16.99■□□□□ 0.31
Trav9-4A0A0B4J1K2 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trav9-4A0A0B4J1K2 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Trav9-4A0A0B4J1K2 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trav9-4A0A0B4J1K2 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trav9-4A0A0B4J1K2 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC16.99■□□□□ 0.31
Trav9-4A0A0B4J1K2 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trav9-4A0A0B4J1K2 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trav9-4A0A0B4J1K2 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC16.98■□□□□ 0.31
Trav9-4A0A0B4J1K2 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
Trav9-4A0A0B4J1K2 Gm12818-201ENSMUST00000117562 1349 ntBASIC16.97■□□□□ 0.31
Trav9-4A0A0B4J1K2 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trav9-4A0A0B4J1K2 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Trav9-4A0A0B4J1K2 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC16.97■□□□□ 0.31
Trav9-4A0A0B4J1K2 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Trav9-4A0A0B4J1K2 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trav9-4A0A0B4J1K2 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Trav9-4A0A0B4J1K2 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trav9-4A0A0B4J1K2 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC16.96■□□□□ 0.31
Trav9-4A0A0B4J1K2 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Trav9-4A0A0B4J1K2 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC16.96■□□□□ 0.31
Trav9-4A0A0B4J1K2 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Trav9-4A0A0B4J1K2 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Trav9-4A0A0B4J1K2 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Trav9-4A0A0B4J1K2 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trav9-4A0A0B4J1K2 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC16.95■□□□□ 0.3
Trav9-4A0A0B4J1K2 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trav9-4A0A0B4J1K2 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trav9-4A0A0B4J1K2 AC122317.2-201ENSMUST00000218708 1248 ntBASIC16.95■□□□□ 0.3
Trav9-4A0A0B4J1K2 Gm9812-201ENSMUST00000061934 968 ntBASIC16.95■□□□□ 0.3
Trav9-4A0A0B4J1K2 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Trav9-4A0A0B4J1K2 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav9-4A0A0B4J1K2 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav9-4A0A0B4J1K2 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC16.94■□□□□ 0.3
Trav9-4A0A0B4J1K2 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC16.94■□□□□ 0.3
Trav9-4A0A0B4J1K2 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav9-4A0A0B4J1K2 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Trav9-4A0A0B4J1K2 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC16.93■□□□□ 0.3
Trav9-4A0A0B4J1K2 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav9-4A0A0B4J1K2 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav9-4A0A0B4J1K2 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav9-4A0A0B4J1K2 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav9-4A0A0B4J1K2 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav9-4A0A0B4J1K2 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC16.92■□□□□ 0.3
Trav9-4A0A0B4J1K2 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
Trav9-4A0A0B4J1K2 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
Trav9-4A0A0B4J1K2 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav9-4A0A0B4J1K2 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Trav9-4A0A0B4J1K2 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Trav9-4A0A0B4J1K2 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Trav9-4A0A0B4J1K2 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav9-4A0A0B4J1K2 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Trav9-4A0A0B4J1K2 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav9-4A0A0B4J1K2 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav9-4A0A0B4J1K2 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav9-4A0A0B4J1K2 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Trav9-4A0A0B4J1K2 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav9-4A0A0B4J1K2 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav9-4A0A0B4J1K2 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav9-4A0A0B4J1K2 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav9-4A0A0B4J1K2 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav9-4A0A0B4J1K2 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav9-4A0A0B4J1K2 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav9-4A0A0B4J1K2 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav9-4A0A0B4J1K2 AC153911.1-201ENSMUST00000220378 758 ntBASIC16.89■□□□□ 0.29
Trav9-4A0A0B4J1K2 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav9-4A0A0B4J1K2 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav9-4A0A0B4J1K2 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Trav9-4A0A0B4J1K2 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Trav9-4A0A0B4J1K2 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav9-4A0A0B4J1K2 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC16.87■□□□□ 0.29
Trav9-4A0A0B4J1K2 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Trav9-4A0A0B4J1K2 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav9-4A0A0B4J1K2 Scarna2-201ENSMUST00000157560 414 ntBASIC16.87■□□□□ 0.29
Trav9-4A0A0B4J1K2 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav9-4A0A0B4J1K2 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav9-4A0A0B4J1K2 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav9-4A0A0B4J1K2 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav9-4A0A0B4J1K2 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC16.86■□□□□ 0.29
Trav9-4A0A0B4J1K2 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav9-4A0A0B4J1K2 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav9-4A0A0B4J1K2 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC16.86■□□□□ 0.29
Trav9-4A0A0B4J1K2 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Trav9-4A0A0B4J1K2 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Trav9-4A0A0B4J1K2 Terc-201ENSMUST00000082862 423 ntBASIC16.85■□□□□ 0.29
Trav9-4A0A0B4J1K2 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Trav9-4A0A0B4J1K2 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav9-4A0A0B4J1K2 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 89.3 ms