Protein–RNA interactions for Protein: A0A0B4J1J1

Igkv5-45, Immunoglobulin kappa chain variable 5-45 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv5-45A0A0B4J1J1 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Igkv5-45A0A0B4J1J1 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Igkv5-45A0A0B4J1J1 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC23.69■■□□□ 1.38
Igkv5-45A0A0B4J1J1 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC23.69■■□□□ 1.38
Igkv5-45A0A0B4J1J1 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
Igkv5-45A0A0B4J1J1 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Igkv5-45A0A0B4J1J1 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Igkv5-45A0A0B4J1J1 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Igkv5-45A0A0B4J1J1 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC23.68■■□□□ 1.38
Igkv5-45A0A0B4J1J1 Gm27502-201ENSMUST00000183495 199 ntBASIC23.68■■□□□ 1.38
Igkv5-45A0A0B4J1J1 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Igkv5-45A0A0B4J1J1 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Igkv5-45A0A0B4J1J1 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC23.68■■□□□ 1.38
Igkv5-45A0A0B4J1J1 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC23.67■■□□□ 1.38
Igkv5-45A0A0B4J1J1 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Igkv5-45A0A0B4J1J1 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Igkv5-45A0A0B4J1J1 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC23.67■■□□□ 1.38
Igkv5-45A0A0B4J1J1 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Igkv5-45A0A0B4J1J1 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC23.66■■□□□ 1.38
Igkv5-45A0A0B4J1J1 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
Igkv5-45A0A0B4J1J1 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
Igkv5-45A0A0B4J1J1 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC23.64■■□□□ 1.37
Igkv5-45A0A0B4J1J1 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Igkv5-45A0A0B4J1J1 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Igkv5-45A0A0B4J1J1 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Igkv5-45A0A0B4J1J1 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC23.63■■□□□ 1.37
Igkv5-45A0A0B4J1J1 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Igkv5-45A0A0B4J1J1 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC23.63■■□□□ 1.37
Igkv5-45A0A0B4J1J1 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC23.63■■□□□ 1.37
Igkv5-45A0A0B4J1J1 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
Igkv5-45A0A0B4J1J1 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC23.62■■□□□ 1.37
Igkv5-45A0A0B4J1J1 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Igkv5-45A0A0B4J1J1 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Igkv5-45A0A0B4J1J1 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
Igkv5-45A0A0B4J1J1 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Igkv5-45A0A0B4J1J1 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
Igkv5-45A0A0B4J1J1 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
Igkv5-45A0A0B4J1J1 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Igkv5-45A0A0B4J1J1 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC23.61■■□□□ 1.37
Igkv5-45A0A0B4J1J1 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
Igkv5-45A0A0B4J1J1 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC23.6■■□□□ 1.37
Igkv5-45A0A0B4J1J1 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
Igkv5-45A0A0B4J1J1 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC23.6■■□□□ 1.37
Igkv5-45A0A0B4J1J1 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
Igkv5-45A0A0B4J1J1 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
Igkv5-45A0A0B4J1J1 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC23.6■■□□□ 1.37
Igkv5-45A0A0B4J1J1 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Igkv5-45A0A0B4J1J1 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC23.59■■□□□ 1.37
Igkv5-45A0A0B4J1J1 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC23.59■■□□□ 1.37
Igkv5-45A0A0B4J1J1 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Igkv5-45A0A0B4J1J1 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
Igkv5-45A0A0B4J1J1 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Igkv5-45A0A0B4J1J1 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC23.59■■□□□ 1.37
Igkv5-45A0A0B4J1J1 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC23.58■■□□□ 1.37
Igkv5-45A0A0B4J1J1 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC23.58■■□□□ 1.37
Igkv5-45A0A0B4J1J1 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Igkv5-45A0A0B4J1J1 Gm14523-201ENSMUST00000117260 558 ntBASIC23.58■■□□□ 1.37
Igkv5-45A0A0B4J1J1 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Igkv5-45A0A0B4J1J1 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC23.58■■□□□ 1.37
Igkv5-45A0A0B4J1J1 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC23.58■■□□□ 1.36
Igkv5-45A0A0B4J1J1 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC23.57■■□□□ 1.36
Igkv5-45A0A0B4J1J1 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC23.57■■□□□ 1.36
Igkv5-45A0A0B4J1J1 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Igkv5-45A0A0B4J1J1 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Igkv5-45A0A0B4J1J1 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC23.55■■□□□ 1.36
Igkv5-45A0A0B4J1J1 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC23.55■■□□□ 1.36
Igkv5-45A0A0B4J1J1 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
Igkv5-45A0A0B4J1J1 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Igkv5-45A0A0B4J1J1 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC23.55■■□□□ 1.36
Igkv5-45A0A0B4J1J1 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Igkv5-45A0A0B4J1J1 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC23.55■■□□□ 1.36
Igkv5-45A0A0B4J1J1 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
Igkv5-45A0A0B4J1J1 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Igkv5-45A0A0B4J1J1 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC23.53■■□□□ 1.36
Igkv5-45A0A0B4J1J1 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
Igkv5-45A0A0B4J1J1 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
Igkv5-45A0A0B4J1J1 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC23.53■■□□□ 1.36
Igkv5-45A0A0B4J1J1 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Igkv5-45A0A0B4J1J1 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC23.52■■□□□ 1.36
Igkv5-45A0A0B4J1J1 Gm7332-201ENSMUST00000118351 454 ntBASIC23.52■■□□□ 1.36
Igkv5-45A0A0B4J1J1 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
Igkv5-45A0A0B4J1J1 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
Igkv5-45A0A0B4J1J1 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Igkv5-45A0A0B4J1J1 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Igkv5-45A0A0B4J1J1 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Igkv5-45A0A0B4J1J1 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC23.51■■□□□ 1.35
Igkv5-45A0A0B4J1J1 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC23.51■■□□□ 1.35
Igkv5-45A0A0B4J1J1 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC23.51■■□□□ 1.35
Igkv5-45A0A0B4J1J1 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC23.51■■□□□ 1.35
Igkv5-45A0A0B4J1J1 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
Igkv5-45A0A0B4J1J1 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC23.5■■□□□ 1.35
Igkv5-45A0A0B4J1J1 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
Igkv5-45A0A0B4J1J1 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
Igkv5-45A0A0B4J1J1 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC23.49■■□□□ 1.35
Igkv5-45A0A0B4J1J1 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC23.48■■□□□ 1.35
Igkv5-45A0A0B4J1J1 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC23.48■■□□□ 1.35
Igkv5-45A0A0B4J1J1 Gm44428-201ENSMUST00000204474 874 ntBASIC23.48■■□□□ 1.35
Igkv5-45A0A0B4J1J1 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Igkv5-45A0A0B4J1J1 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC23.48■■□□□ 1.35
Igkv5-45A0A0B4J1J1 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Retrieved 100 of 76,532 protein–RNA pairs in 10.5 ms