Protein–RNA interactions for Protein: A0A0A6YY41

Ighv1-47, Immunoglobulin heavy variable 1-47 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-47A0A0A6YY41 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Ighv1-47A0A0A6YY41 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC18.71■□□□□ 0.59
Ighv1-47A0A0A6YY41 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Ighv1-47A0A0A6YY41 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ighv1-47A0A0A6YY41 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Ighv1-47A0A0A6YY41 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ighv1-47A0A0A6YY41 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Ighv1-47A0A0A6YY41 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC18.7■□□□□ 0.58
Ighv1-47A0A0A6YY41 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ighv1-47A0A0A6YY41 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Ighv1-47A0A0A6YY41 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ighv1-47A0A0A6YY41 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Ighv1-47A0A0A6YY41 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ighv1-47A0A0A6YY41 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ighv1-47A0A0A6YY41 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Ighv1-47A0A0A6YY41 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Ighv1-47A0A0A6YY41 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ighv1-47A0A0A6YY41 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ighv1-47A0A0A6YY41 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ighv1-47A0A0A6YY41 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ighv1-47A0A0A6YY41 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Ighv1-47A0A0A6YY41 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ighv1-47A0A0A6YY41 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ighv1-47A0A0A6YY41 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Ighv1-47A0A0A6YY41 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ighv1-47A0A0A6YY41 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Ighv1-47A0A0A6YY41 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Ighv1-47A0A0A6YY41 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Ighv1-47A0A0A6YY41 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Ighv1-47A0A0A6YY41 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ighv1-47A0A0A6YY41 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ighv1-47A0A0A6YY41 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Ighv1-47A0A0A6YY41 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ighv1-47A0A0A6YY41 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Ighv1-47A0A0A6YY41 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Ighv1-47A0A0A6YY41 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Ighv1-47A0A0A6YY41 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ighv1-47A0A0A6YY41 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ighv1-47A0A0A6YY41 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ighv1-47A0A0A6YY41 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Ighv1-47A0A0A6YY41 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ighv1-47A0A0A6YY41 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ighv1-47A0A0A6YY41 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Ighv1-47A0A0A6YY41 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Ighv1-47A0A0A6YY41 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ighv1-47A0A0A6YY41 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC18.63■□□□□ 0.57
Ighv1-47A0A0A6YY41 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ighv1-47A0A0A6YY41 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC18.63■□□□□ 0.57
Ighv1-47A0A0A6YY41 Gm37136-201ENSMUST00000194368 194 ntBASIC18.63■□□□□ 0.57
Ighv1-47A0A0A6YY41 Gm14121-201ENSMUST00000121441 1380 ntBASIC18.63■□□□□ 0.57
Ighv1-47A0A0A6YY41 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC18.63■□□□□ 0.57
Ighv1-47A0A0A6YY41 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC18.63■□□□□ 0.57
Ighv1-47A0A0A6YY41 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Ighv1-47A0A0A6YY41 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC18.62■□□□□ 0.57
Ighv1-47A0A0A6YY41 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
Ighv1-47A0A0A6YY41 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC18.62■□□□□ 0.57
Ighv1-47A0A0A6YY41 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ighv1-47A0A0A6YY41 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Ighv1-47A0A0A6YY41 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ighv1-47A0A0A6YY41 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC18.61■□□□□ 0.57
Ighv1-47A0A0A6YY41 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ighv1-47A0A0A6YY41 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Ighv1-47A0A0A6YY41 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Ighv1-47A0A0A6YY41 AC131739.1-201ENSMUST00000221692 1245 ntBASIC18.61■□□□□ 0.57
Ighv1-47A0A0A6YY41 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ighv1-47A0A0A6YY41 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ighv1-47A0A0A6YY41 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC18.6■□□□□ 0.57
Ighv1-47A0A0A6YY41 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ighv1-47A0A0A6YY41 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ighv1-47A0A0A6YY41 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ighv1-47A0A0A6YY41 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC18.6■□□□□ 0.57
Ighv1-47A0A0A6YY41 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Ighv1-47A0A0A6YY41 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Ighv1-47A0A0A6YY41 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Ighv1-47A0A0A6YY41 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Ighv1-47A0A0A6YY41 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Ighv1-47A0A0A6YY41 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC18.59■□□□□ 0.57
Ighv1-47A0A0A6YY41 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC18.59■□□□□ 0.57
Ighv1-47A0A0A6YY41 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC18.59■□□□□ 0.57
Ighv1-47A0A0A6YY41 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ighv1-47A0A0A6YY41 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Ighv1-47A0A0A6YY41 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Ighv1-47A0A0A6YY41 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Ighv1-47A0A0A6YY41 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Ighv1-47A0A0A6YY41 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ighv1-47A0A0A6YY41 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Ighv1-47A0A0A6YY41 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ighv1-47A0A0A6YY41 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ighv1-47A0A0A6YY41 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ighv1-47A0A0A6YY41 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ighv1-47A0A0A6YY41 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ighv1-47A0A0A6YY41 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ighv1-47A0A0A6YY41 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Ighv1-47A0A0A6YY41 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ighv1-47A0A0A6YY41 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC18.56■□□□□ 0.56
Ighv1-47A0A0A6YY41 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ighv1-47A0A0A6YY41 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Ighv1-47A0A0A6YY41 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ighv1-47A0A0A6YY41 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ighv1-47A0A0A6YY41 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms