Protein–RNA interactions for Protein: A0A075B645

Trav14n-3, T cell receptor alpha variable 14N-3 (Fragment), mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav14n-3A0A075B645 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav14n-3A0A075B645 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trav14n-3A0A075B645 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trav14n-3A0A075B645 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Trav14n-3A0A075B645 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Trav14n-3A0A075B645 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trav14n-3A0A075B645 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trav14n-3A0A075B645 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
Trav14n-3A0A075B645 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Trav14n-3A0A075B645 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trav14n-3A0A075B645 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trav14n-3A0A075B645 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trav14n-3A0A075B645 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trav14n-3A0A075B645 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trav14n-3A0A075B645 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Trav14n-3A0A075B645 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trav14n-3A0A075B645 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trav14n-3A0A075B645 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Trav14n-3A0A075B645 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trav14n-3A0A075B645 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trav14n-3A0A075B645 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trav14n-3A0A075B645 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC17.17■□□□□ 0.34
Trav14n-3A0A075B645 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trav14n-3A0A075B645 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Trav14n-3A0A075B645 Gm13042-201ENSMUST00000119244 1955 ntBASIC17.17■□□□□ 0.34
Trav14n-3A0A075B645 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trav14n-3A0A075B645 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trav14n-3A0A075B645 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trav14n-3A0A075B645 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trav14n-3A0A075B645 Gm6277-202ENSMUST00000224036 2779 ntBASIC17.16■□□□□ 0.34
Trav14n-3A0A075B645 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trav14n-3A0A075B645 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Trav14n-3A0A075B645 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav14n-3A0A075B645 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav14n-3A0A075B645 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC17.15■□□□□ 0.34
Trav14n-3A0A075B645 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC17.15■□□□□ 0.34
Trav14n-3A0A075B645 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav14n-3A0A075B645 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trav14n-3A0A075B645 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trav14n-3A0A075B645 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Trav14n-3A0A075B645 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Trav14n-3A0A075B645 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trav14n-3A0A075B645 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trav14n-3A0A075B645 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trav14n-3A0A075B645 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trav14n-3A0A075B645 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Trav14n-3A0A075B645 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trav14n-3A0A075B645 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trav14n-3A0A075B645 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trav14n-3A0A075B645 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trav14n-3A0A075B645 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav14n-3A0A075B645 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Trav14n-3A0A075B645 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav14n-3A0A075B645 Dmtn-209ENSMUST00000228295 2572 ntBASIC17.12■□□□□ 0.33
Trav14n-3A0A075B645 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav14n-3A0A075B645 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav14n-3A0A075B645 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav14n-3A0A075B645 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trav14n-3A0A075B645 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC17.11■□□□□ 0.33
Trav14n-3A0A075B645 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Trav14n-3A0A075B645 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav14n-3A0A075B645 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Trav14n-3A0A075B645 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav14n-3A0A075B645 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav14n-3A0A075B645 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav14n-3A0A075B645 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav14n-3A0A075B645 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Trav14n-3A0A075B645 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav14n-3A0A075B645 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav14n-3A0A075B645 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav14n-3A0A075B645 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav14n-3A0A075B645 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav14n-3A0A075B645 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav14n-3A0A075B645 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Trav14n-3A0A075B645 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Trav14n-3A0A075B645 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav14n-3A0A075B645 Gm6934-201ENSMUST00000194780 1905 ntBASIC17.08■□□□□ 0.33
Trav14n-3A0A075B645 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trav14n-3A0A075B645 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trav14n-3A0A075B645 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trav14n-3A0A075B645 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trav14n-3A0A075B645 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Trav14n-3A0A075B645 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Trav14n-3A0A075B645 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav14n-3A0A075B645 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav14n-3A0A075B645 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trav14n-3A0A075B645 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Trav14n-3A0A075B645 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trav14n-3A0A075B645 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Trav14n-3A0A075B645 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trav14n-3A0A075B645 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
Trav14n-3A0A075B645 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Trav14n-3A0A075B645 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Trav14n-3A0A075B645 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
Trav14n-3A0A075B645 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav14n-3A0A075B645 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
Trav14n-3A0A075B645 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Trav14n-3A0A075B645 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav14n-3A0A075B645 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav14n-3A0A075B645 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 78.5 ms