Protein–RNA interactions for Protein: A0A075B642

Trav10, T cell receptor alpha variable 10 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav10A0A075B642 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trav10A0A075B642 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trav10A0A075B642 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trav10A0A075B642 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Trav10A0A075B642 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Trav10A0A075B642 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC20.1■□□□□ 0.81
Trav10A0A075B642 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Trav10A0A075B642 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC20.1■□□□□ 0.81
Trav10A0A075B642 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trav10A0A075B642 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC20.09■□□□□ 0.81
Trav10A0A075B642 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Trav10A0A075B642 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC20.08■□□□□ 0.81
Trav10A0A075B642 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC20.08■□□□□ 0.81
Trav10A0A075B642 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC20.08■□□□□ 0.81
Trav10A0A075B642 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
Trav10A0A075B642 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
Trav10A0A075B642 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Trav10A0A075B642 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Trav10A0A075B642 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Trav10A0A075B642 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Trav10A0A075B642 Gm13889-201ENSMUST00000099689 1386 ntBASIC20.07■□□□□ 0.8
Trav10A0A075B642 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Trav10A0A075B642 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Trav10A0A075B642 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trav10A0A075B642 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trav10A0A075B642 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Trav10A0A075B642 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trav10A0A075B642 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC20.05■□□□□ 0.8
Trav10A0A075B642 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC20.05■□□□□ 0.8
Trav10A0A075B642 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
Trav10A0A075B642 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trav10A0A075B642 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trav10A0A075B642 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trav10A0A075B642 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trav10A0A075B642 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trav10A0A075B642 Mir3960-201ENSMUST00000198213 73 ntBASIC20.03■□□□□ 0.8
Trav10A0A075B642 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Trav10A0A075B642 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trav10A0A075B642 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trav10A0A075B642 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trav10A0A075B642 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trav10A0A075B642 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trav10A0A075B642 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trav10A0A075B642 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trav10A0A075B642 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trav10A0A075B642 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trav10A0A075B642 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trav10A0A075B642 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trav10A0A075B642 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC20.01■□□□□ 0.79
Trav10A0A075B642 AC167019.3-201ENSMUST00000228225 1266 ntBASIC20.01■□□□□ 0.79
Trav10A0A075B642 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Trav10A0A075B642 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Trav10A0A075B642 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Trav10A0A075B642 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Trav10A0A075B642 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trav10A0A075B642 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trav10A0A075B642 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Trav10A0A075B642 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Trav10A0A075B642 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trav10A0A075B642 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Trav10A0A075B642 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Trav10A0A075B642 Gm45364-201ENSMUST00000210883 159 ntBASIC19.98■□□□□ 0.79
Trav10A0A075B642 AC154454.1-201ENSMUST00000225253 216 ntBASIC19.98■□□□□ 0.79
Trav10A0A075B642 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Trav10A0A075B642 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trav10A0A075B642 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trav10A0A075B642 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Trav10A0A075B642 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC19.97■□□□□ 0.79
Trav10A0A075B642 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trav10A0A075B642 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trav10A0A075B642 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Trav10A0A075B642 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trav10A0A075B642 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC19.95■□□□□ 0.78
Trav10A0A075B642 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC19.95■□□□□ 0.78
Trav10A0A075B642 Gm42699-201ENSMUST00000198104 1657 ntBASIC19.95■□□□□ 0.78
Trav10A0A075B642 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Trav10A0A075B642 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC19.95■□□□□ 0.78
Trav10A0A075B642 Gm12818-201ENSMUST00000117562 1349 ntBASIC19.94■□□□□ 0.78
Trav10A0A075B642 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Trav10A0A075B642 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Trav10A0A075B642 Il17rd-202ENSMUST00000223942 2186 ntBASIC19.93■□□□□ 0.78
Trav10A0A075B642 Gm9812-201ENSMUST00000061934 968 ntBASIC19.93■□□□□ 0.78
Trav10A0A075B642 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trav10A0A075B642 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trav10A0A075B642 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trav10A0A075B642 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC19.93■□□□□ 0.78
Trav10A0A075B642 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trav10A0A075B642 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Trav10A0A075B642 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Trav10A0A075B642 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC19.92■□□□□ 0.78
Trav10A0A075B642 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
Trav10A0A075B642 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Trav10A0A075B642 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trav10A0A075B642 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trav10A0A075B642 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Trav10A0A075B642 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Trav10A0A075B642 Gm6311-201ENSMUST00000073790 878 ntBASIC19.91■□□□□ 0.78
Trav10A0A075B642 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trav10A0A075B642 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC19.91■□□□□ 0.78
Trav10A0A075B642 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms